RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 LGALS13Q9UHV8 139 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 WIPI2Q9Y4P8 454 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 CORINQ9Y5Q5 1042 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 NOX1Q9Y5S8 564 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 GPR45Q9Y5Y3 372 aa10.74□□□□□ -0.69
TRAF4-209ENST00000473421 LOC102725191A0A1B0GVB3 256 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 A0A1B0GWA3 101 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 A0A1W2PPW3 197 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 C17orf100A8MU93 164 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 SDHDO14521 159 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 TPST1O60507 370 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 PRSS23O95084 383 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 IGHV2-5P01817 119 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 ZFP36P26651 326 aaKnown RBP10.73□□□□□ -0.69
TRAF4-209ENST00000473421 CRATP43155 626 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 LIMS1P48059 325 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 RPL14P50914 215 aaKnown RBP10.73□□□□□ -0.69
TRAF4-209ENST00000473421 CLNS1AP54105 237 aaKnown RBP10.73□□□□□ -0.69
TRAF4-209ENST00000473421 MRPS11P82912 194 aaKnown RBP10.73□□□□□ -0.69
TRAF4-209ENST00000473421 MPP2Q14168 576 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 SHISA2Q6UWI4 295 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 C6orf89Q6UWU4 347 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 TREML4Q6UXN2 200 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 HOMEZQ8IX15 550 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 CCDC36Q8IYA8 594 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 C10orf111Q8N326 155 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 SIGLECL1Q8N7X8 197 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 SLC41A3Q96GZ6 507 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 ZNF48Q96MX3 618 aaPredicted RBP10.73□□□□□ -0.69
TRAF4-209ENST00000473421 ZIM3Q96PE6 472 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 FOXB1Q99853 325 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 ZNF416Q9BWM5 594 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 SUCNR1Q9BXA5 334 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 WDR55Q9H6Y2 383 aaPredicted RBP10.73□□□□□ -0.69
TRAF4-209ENST00000473421 DCAF16Q9NXF7 216 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 P2RX2Q9UBL9 471 aa10.73□□□□□ -0.69
TRAF4-209ENST00000473421 A0A087WUJ7 227 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 A0A096LPI6 279 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 A0A0G2JMP0 313 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 A0A0X1KG70 313 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 AIM2O14862 343 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 TPST2O60704 377 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 SERPINI2O75830 405 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 BGLAPP02818 100 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 SERPINE1P05121 402 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 MYZAPP0CAP1 466 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 MAKP20794 623 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 DSTNP60981 165 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 LCN2P80188 198 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 GLO1Q04760 184 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 SRSF4Q08170 494 aaKnown RBP10.72□□□□□ -0.69
TRAF4-209ENST00000473421 DPY19L1Q2PZI1 675 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 MIDNQ504T8 468 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 KLF17Q5JT82 389 aaPredicted RBP10.72□□□□□ -0.69
TRAF4-209ENST00000473421 FAM69AQ5T7M9 428 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 DCAF12L2Q5VW00 463 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 UEVLDQ8IX04 471 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 MIER2Q8N344 545 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 BPIFB2Q8N4F0 458 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 OR4M2Q8NGB6 313 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 NANPQ8TBE9 248 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 JMJD8Q96S16 334 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 SH3GL3Q99963 347 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 C7orf69Q9H7B7 122 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 MEAF6Q9HAF1 191 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 SLC52A3Q9NQ40 469 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 HINT3Q9NQE9 182 aaKnown RBP10.72□□□□□ -0.69
TRAF4-209ENST00000473421 MMP26Q9NRE1 261 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 ZNF69Q9UC07 566 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 POFUT2Q9Y2G5 429 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 RAP2CQ9Y3L5 183 aa10.72□□□□□ -0.69
TRAF4-209ENST00000473421 IGLV3-9A0A075B6K5 115 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 DNAJC9-AS1A6NH13 148 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 RFXANKO14593 260 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 BCL10O95999 233 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 SERPINA5P05154 406 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 BGNP21810 368 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 GTF2E2P29084 291 aaKnown RBP10.71□□□□□ -0.69
TRAF4-209ENST00000473421 CRYBB2P43320 205 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 SLC1A6P48664 564 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 CRISP3P54108 245 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 GALK2Q01415 458 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 LARS2Q15031 903 aaKnown RBP10.71□□□□□ -0.69
TRAF4-209ENST00000473421 TSTQ16762 297 aaKnown RBP10.71□□□□□ -0.69
TRAF4-209ENST00000473421 NKPD1Q17RQ9 610 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 RGS7BPQ6MZT1 257 aaPredicted RBP10.71□□□□□ -0.69
TRAF4-209ENST00000473421 OGFOD2Q6N063 350 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 LRFN4Q6PJG9 635 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 USP51Q70EK9 711 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 JAZF1Q86VZ6 243 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 TRIML2Q8N7C3 387 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 LRR1Q96L50 414 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 ULBP2Q9BZM5 246 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 ZNF385DQ9H6B1 395 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 UNKLQ9H9P5 680 aaKnown RBP10.71□□□□□ -0.69
TRAF4-209ENST00000473421 TPT1P8Q9HAU6 139 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 HAO1Q9UJM8 370 aa10.71□□□□□ -0.69
TRAF4-209ENST00000473421 NOTCH1P46531 2555 aa10.71□□□□□ -0.7
TRAF4-209ENST00000473421 TRAV36DV7A0A075B6V5 113 aa10.7□□□□□ -0.7
TRAF4-209ENST00000473421 IGHV1-69-2A0A0G2JMI3 117 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms