RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 SLC6A2P23975 617 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 ALDH3B1P43353 468 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 GIPRP48546 466 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 BIDP55957 195 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 ERVS71-1P61550 626 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 MYBPC1Q00872 1141 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 CHRNB3Q05901 458 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 PMS2P3Q13401 168 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 MELKQ14680 651 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 RAB39AQ14964 217 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 MFSD13AQ14CX5 517 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 ZSWIM7Q19AV6 140 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 ALKBH6Q3KRA9 238 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 RABL3Q5HYI8 236 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 TMEM255AQ5JRV8 349 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 FAM120AOSQ5T036 256 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 CGB2Q6NT52 195 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 ULK3Q6PHR2 472 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 SLC46A3Q7Z3Q1 461 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 DHDDSQ86SQ9 333 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 ARMC8Q8IUR7 673 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 NKAIN4Q8IVV8 208 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 UEVLDQ8IX04 471 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 GPR137CQ8N3F9 429 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 C10orf53Q8N6V4 93 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 OR10A6Q8NH74 314 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 PROX1Q92786 737 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 SLC47A1Q96FL8 570 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 ANKRD27Q96NW4 1050 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 TSPAN32Q96QS1 320 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 SH3GL3Q99963 347 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 SYT3Q9BQG1 590 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 PRSS27Q9BQR3 290 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 KATNB1Q9BVA0 655 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 BEX2Q9BXY8 128 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 TMEM27Q9HBJ8 222 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 MEPEQ9NQ76 525 aaPredicted RBP6.96□□□□□ -1.3
USP48-207ENST00000471752 RCE1Q9Y256 329 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 GMEB1Q9Y692 573 aa6.96□□□□□ -1.3
USP48-207ENST00000471752 TRRAPQ9Y4A5 3859 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 IGKV1D-43A0A0B4J1Z2 117 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 TMEM247A6NEH6 219 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 ZNF99A8MXY4 864 aaPredicted RBP6.95□□□□□ -1.3
USP48-207ENST00000471752 NCR1O76036 304 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 TGFAP01135 160 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 DAOP14920 347 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 NQO1P15559 274 aaKnown RBP6.95□□□□□ -1.3
USP48-207ENST00000471752 NR4A1P22736 598 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 PTDSS1P48651 473 aaKnown RBP6.95□□□□□ -1.3
USP48-207ENST00000471752 PDLIM4P50479 330 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 DSCR9P59020 149 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 STX1BP61266 288 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 DBPQ10586 325 aaPredicted RBP6.95□□□□□ -1.3
USP48-207ENST00000471752 SNTB2Q13425 540 aaKnown RBP6.95□□□□□ -1.3
USP48-207ENST00000471752 DAG1Q14118 895 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 SQLEQ14534 574 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 EFNB3Q15768 340 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 ENTPD8Q5MY95 495 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 ZNF813Q6ZN06 617 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 SSX8Q7RTT4 187 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 DPP10Q8N608 796 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 CLDN22Q8N7P3 220 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 HIPK4Q8NE63 616 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 NUP37Q8NFH4 326 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 MOSPD2Q8NHP6 518 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 PFN4Q8NHR9 129 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 DNAJA4Q8WW22 397 aaPredicted RBP6.95□□□□□ -1.3
USP48-207ENST00000471752 TMEM54Q969K7 222 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 YIPF5Q969M3 257 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 SLC35B4Q969S0 331 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 REPIN1Q9BWE0 567 aaKnown RBP6.95□□□□□ -1.3
USP48-207ENST00000471752 OR51B6Q9H340 312 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 RAD21L1Q9H4I0 556 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 NARFLQ9H6Q4 476 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 KAT8Q9H7Z6 458 aaKnown RBP6.95□□□□□ -1.3
USP48-207ENST00000471752 C12orf10Q9HB07 376 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 NPHS2Q9NP85 383 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 OBP2BQ9NPH6 170 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 C20orf141Q9NUB4 165 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 THUMPD1Q9NXG2 353 aaKnown RBP6.95□□□□□ -1.3
USP48-207ENST00000471752 MRPL39Q9NYK5 338 aaKnown RBP6.95□□□□□ -1.3
USP48-207ENST00000471752 SLC7A7Q9UM01 511 aa6.95□□□□□ -1.3
USP48-207ENST00000471752 MGAM2Q2M2H8 2515 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 A0A0G2JND7 137 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 FXYD1O00168 92 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 OR2T1O43869 369 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 PIP5K1CO60331 668 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 SCG5P05408 212 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 FAM157CP0CG43 387 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 ADORA3P0DMS8 318 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 NAT2P11245 290 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 APEHP13798 732 aaKnown RBP6.94□□□□□ -1.3
USP48-207ENST00000471752 ZNF23P17027 643 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 GTF2E2P29084 291 aaKnown RBP6.94□□□□□ -1.3
USP48-207ENST00000471752 OR1E2P47887 323 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 ATP4BP51164 291 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 UGT2B15P54855 530 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 SNRPD2P62316 118 aaKnown RBP6.94□□□□□ -1.3
USP48-207ENST00000471752 RAB1AP62820 205 aa6.94□□□□□ -1.3
USP48-207ENST00000471752 PUDPQ08623 228 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms