RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 EIF1BO60739 113 aaKnown RBP8.41□□□□□ -1.06
VPS52-216ENST00000471309 TFP02787 698 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 HPNP05981 417 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 SP1P08047 785 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 MRPL3P09001 348 aaKnown RBP8.41□□□□□ -1.06
VPS52-216ENST00000471309 RFPL3SP0C7P2 107 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 OR2T7P0C7T2 308 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 CD46P15529 392 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 CPEP16870 476 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 GADD45AP24522 165 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 GDF1P27539 372 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 BLVRAP53004 296 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 OR2B6P58173 313 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 LCN6P62502 163 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 CSNK2A1P68400 391 aaPredicted RBP8.41□□□□□ -1.06
VPS52-216ENST00000471309 BDH1Q02338 343 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 HSF2Q03933 536 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 AQP6Q13520 282 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 GALEQ14376 348 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 TOMM20Q15388 145 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 SSX1Q16384 188 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 HYAL4Q2M3T9 481 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 OR2G6Q5TZ20 316 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 SLC25A25Q6KCM7 469 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 ZNF322Q6U7Q0 402 aaPredicted RBP8.41□□□□□ -1.06
VPS52-216ENST00000471309 TMPRSS11AQ6ZMR5 421 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 ASB18Q6ZVZ8 466 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 SLC35D2Q76EJ3 337 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 HDDC2Q7Z4H3 204 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 LHFPL3Q86UP9 236 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 ZBTB46Q86UZ6 589 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 ATCAYQ86WG3 371 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 SULF2Q8IWU5 870 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 SLC35F2Q8IXU6 374 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 GHDCQ8N2G8 530 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 FAM83FQ8NEG4 500 aaPredicted RBP8.41□□□□□ -1.06
VPS52-216ENST00000471309 OR6K6Q8NGW6 343 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 OR2T27Q8NH04 317 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 ZNRF4Q8WWF5 429 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 HAS2Q92819 552 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 RELTQ969Z4 430 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 ZMYND19Q96E35 227 aaPredicted RBP8.41□□□□□ -1.06
VPS52-216ENST00000471309 SCMH1Q96GD3 660 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 SFXN2Q96NB2 322 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 ARHGAP9Q9BRR9 750 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 ALG12Q9BV10 488 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 ALG8Q9BVK2 526 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 SYT4Q9H2B2 425 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 ZNF552Q9H707 407 aaPredicted RBP8.41□□□□□ -1.06
VPS52-216ENST00000471309 PLA2G3Q9NZ20 509 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 KLK13Q9UKR3 277 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 FAM186AA6NE01 2351 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 NCKAP5O14513 1909 aa8.41□□□□□ -1.06
VPS52-216ENST00000471309 ZNF292O60281 2723 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 IGLV1-36A0A0B4J1U3 117 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 SLC22A23A1A5C7 686 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 DCDC2BA2VCK2 349 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 A6NL46 340 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 KLRC4-KLRK1H3BQV0 150 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 DCTN6O00399 190 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 TRAF3IP2O43734 574 aaPredicted RBP8.4□□□□□ -1.06
VPS52-216ENST00000471309 AIREO43918 545 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 CEACAM4O75871 244 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 GLSO94925 669 aaPredicted RBP8.4□□□□□ -1.06
VPS52-216ENST00000471309 VAMP5O95183 116 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 BCL10O95999 233 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 OPN1LWP04000 364 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 HLA-DOBP13765 273 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 IFNGR1P15260 489 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 PYCR1P32322 319 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 CD79BP40259 229 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 NAA10P41227 235 aaPredicted RBP8.4□□□□□ -1.06
VPS52-216ENST00000471309 MEOX1P50221 254 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 GFRA1P56159 465 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 ACTA2P62736 377 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 ACTG2P63267 376 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 H3F3AP84243 136 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 ZNF85Q03923 595 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 DBPQ10586 325 aaPredicted RBP8.4□□□□□ -1.06
VPS52-216ENST00000471309 FOXC1Q12948 553 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 NFATC3Q12968 1075 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 TPBGQ13641 420 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 MELKQ14680 651 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 POU4F3Q15319 338 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 WIPI1Q5MNZ9 446 aaPredicted RBP8.4□□□□□ -1.06
VPS52-216ENST00000471309 DNM1P34Q6PK57 102 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 IGFL2Q6UWQ7 119 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 NHLRC1Q6VVB1 395 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 SLC16A9Q7RTY1 509 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 YRDCQ86U90 279 aaKnown RBP8.4□□□□□ -1.06
VPS52-216ENST00000471309 GGNQ86UU5 652 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 UEVLDQ8IX04 471 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 PHC2Q8IXK0 858 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 PM20D2Q8IYS1 436 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 OR6V1Q8N148 313 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 TMEM178AQ8NBL3 297 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 OR51L1Q8NGJ5 315 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 SPRYD4Q8WW59 207 aaPredicted RBP8.4□□□□□ -1.06
VPS52-216ENST00000471309 TM9SF4Q92544 642 aa8.4□□□□□ -1.06
VPS52-216ENST00000471309 UFD1Q92890 307 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms