RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 FAM222BQ8WU58 562 aa10.53□□□□□ -0.72
VPS13D-204ENST00000469054 ZDHHC16Q969W1 377 aa10.53□□□□□ -0.72
VPS13D-204ENST00000469054 DACH2Q96NX9 599 aa10.53□□□□□ -0.72
VPS13D-204ENST00000469054 WFIKKN1Q96NZ8 548 aa10.53□□□□□ -0.72
VPS13D-204ENST00000469054 ALKBH3Q96Q83 286 aaPredicted RBP10.53□□□□□ -0.72
VPS13D-204ENST00000469054 USB1Q9BQ65 265 aaKnown RBP10.53□□□□□ -0.72
VPS13D-204ENST00000469054 ACTR6Q9GZN1 396 aa10.53□□□□□ -0.72
VPS13D-204ENST00000469054 MCCC2Q9HCC0 563 aa10.53□□□□□ -0.72
VPS13D-204ENST00000469054 ARMC1Q9NVT9 282 aa10.53□□□□□ -0.72
VPS13D-204ENST00000469054 CRIM1Q9NZV1 1036 aa10.53□□□□□ -0.72
VPS13D-204ENST00000469054 DNAJB9Q9UBS3 223 aa10.53□□□□□ -0.72
VPS13D-204ENST00000469054 KCNN3Q9UGI6 736 aa10.53□□□□□ -0.72
VPS13D-204ENST00000469054 AP4S1Q9Y587 144 aa10.53□□□□□ -0.72
VPS13D-204ENST00000469054 CACNA1CQ13936 2221 aa10.53□□□□□ -0.72
VPS13D-204ENST00000469054 CIB4A0PJX0 185 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 SH3D21A4FU49 640 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 NPIPB13A6NJU9 1138 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 NPIPB4C9JG80 1138 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 MCIDASD6RGH6 385 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 ZNF587BE7ETH6 402 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 TIPRLO75663 272 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 NDUFB2O95178 105 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 GASTP01350 101 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 CD14P08571 375 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 ZNF26P17031 533 aaPredicted RBP10.52□□□□□ -0.73
VPS13D-204ENST00000469054 DNAJA1P31689 397 aaKnown RBP10.52□□□□□ -0.73
VPS13D-204ENST00000469054 IST1P53990 364 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 TGFBR3Q03167 851 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 TSPAN31Q12999 210 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 MELKQ14680 651 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 KPNB1Q14974 876 aaKnown RBP10.52□□□□□ -0.73
VPS13D-204ENST00000469054 ZSCAN26Q16670 478 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 C9orf135Q5VTT2 229 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 ZNF787Q6DD87 383 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 ZNF770Q6IQ21 691 aaPredicted RBP10.52□□□□□ -0.73
VPS13D-204ENST00000469054 HMBOX1Q6NT76 420 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 C22orf34Q6ZV56 151 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 HDDC2Q7Z4H3 204 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 IGFN1Q86VF2 1251 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 GPR137CQ8N3F9 429 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 AQP11Q8NBQ7 271 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 OR6N1Q8NGY5 312 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 ASB10Q8WXI3 467 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 ZNF566Q969W8 418 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 S100PBPQ96BU1 408 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 SLC25A44Q96H78 314 aaPredicted RBP10.52□□□□□ -0.73
VPS13D-204ENST00000469054 MED18Q9BUE0 208 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 NDEL1Q9GZM8 345 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 TXNIPQ9H3M7 391 aa10.52□□□□□ -0.73
VPS13D-204ENST00000469054 STX18Q9P2W9 335 aaKnown RBP10.52□□□□□ -0.73
VPS13D-204ENST00000469054 ZNF346Q9UL40 294 aaKnown RBP10.52□□□□□ -0.73
VPS13D-204ENST00000469054 CENPBD1B2RD01 187 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 RPL36A-HNRNPH2H7BZ11 118 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 M0R3G1 203 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 DEAF1O75398 565 aaPredicted RBP10.51□□□□□ -0.73
VPS13D-204ENST00000469054 E2F6O75461 281 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 TRMUO75648 421 aaKnown RBP10.51□□□□□ -0.73
VPS13D-204ENST00000469054 RAD51DO75771 328 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 IGHG1P01857 330 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 IGHMP01871 453 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 FASP25445 335 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 RPL4P36578 427 aaKnown RBP10.51□□□□□ -0.73
VPS13D-204ENST00000469054 CSNK1A1P48729 337 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 FXYD6P3P58550 94 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 RPL27P61353 136 aaKnown RBP10.51□□□□□ -0.73
VPS13D-204ENST00000469054 ROR2Q01974 943 aaKnown RBP10.51□□□□□ -0.73
VPS13D-204ENST00000469054 RUNX1T1Q06455 604 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 TOP3AQ13472 1001 aaPredicted RBP10.51□□□□□ -0.73
VPS13D-204ENST00000469054 GABRA6Q16445 453 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 RFX4Q33E94 735 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 PHYHD1Q5SRE7 291 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 ARMC4Q5T2S8 1044 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 OR7E24Q6IFN5 339 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 SMARCD3Q6STE5 483 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 LINGO2Q7L985 606 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 TMEM179BQ7Z7N9 219 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 OR10G2Q8NGC3 310 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 GIPC3Q8TF64 312 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 HSD17B8Q92506 261 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 TMEM54Q969K7 222 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 MUS81Q96NY9 551 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 GPX7Q96SL4 187 aaPredicted RBP10.51□□□□□ -0.73
VPS13D-204ENST00000469054 KCNK17Q96T54 332 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 KATNB1Q9BVA0 655 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 DGCR6LQ9BY27 220 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 POLDIP3Q9BY77 421 aaKnown RBP10.51□□□□□ -0.73
VPS13D-204ENST00000469054 MRPL13Q9BYD1 178 aaKnown RBP10.51□□□□□ -0.73
VPS13D-204ENST00000469054 OR52D1Q9H346 318 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 DENND2DQ9H6A0 471 aaPredicted RBP10.51□□□□□ -0.73
VPS13D-204ENST00000469054 NTN4Q9HB63 628 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 CRLF2Q9HC73 371 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 GPR35Q9HC97 309 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 B3GAT2Q9NPZ5 323 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 ZNF226Q9NYT6 803 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 GLTPQ9NZD2 209 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 MGAT4BQ9UQ53 548 aa10.51□□□□□ -0.73
VPS13D-204ENST00000469054 ARRDC5A6NEK1 342 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 CASKO14936 926 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 THBDP07204 575 aa10.5□□□□□ -0.73
VPS13D-204ENST00000469054 PGA4P0DJD7 388 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms