RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 CD99P14209 185 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 NCK1P16333 377 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 CDH2P19022 906 aaPredicted RBP13.22□□□□□ -0.29
ATG4B-215ENST00000468018 FUT1P19526 365 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 RPS4XP62701 263 aaKnown RBP13.22□□□□□ -0.29
ATG4B-215ENST00000468018 LSM11P83369 360 aaKnown RBP eCLIP13.22□□□□□ -0.29
ATG4B-215ENST00000468018 IL1RL1Q01638 556 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 RPL18Q07020 188 aaKnown RBP13.22□□□□□ -0.29
ATG4B-215ENST00000468018 CAMK2DQ13557 499 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 Q5PR19 223 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 KLHL24Q6TFL4 600 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 SLC35D2Q76EJ3 337 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 PIAS4Q8N2W9 510 aaPredicted RBP13.22□□□□□ -0.29
ATG4B-215ENST00000468018 SGTBQ96EQ0 304 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 CCT8L2Q96SF2 557 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 DHRS9Q9BPW9 319 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 C1QTNF6Q9BXI9 259 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 GORASP2Q9H8Y8 452 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 DCAF13Q9NV06 445 aaKnown RBP13.22□□□□□ -0.29
ATG4B-215ENST00000468018 MED31Q9Y3C7 131 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 RTTNQ86VV8 2226 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 MTORP42345 2549 aa13.22□□□□□ -0.29
ATG4B-215ENST00000468018 NPIPB13A6NJU9 1138 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 NPIPB4C9JG80 1138 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 M0R3G1 203 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 GSTA4O15217 222 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 ARHGEF9O43307 516 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 RNF13O43567 381 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 PIP5K1CO60331 668 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 OR6A2O95222 327 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 ZNF682O95780 498 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 SEMG1P04279 462 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 PGA4P0DJD7 388 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 PGA3P0DJD8 388 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 FOSL1P15407 271 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 BIDP55957 195 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 FHL1Q13642 323 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 KRT72Q14CN4 511 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 HIST3H3Q16695 136 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 IQCCQ4KMZ1 466 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 GLYATQ6IB77 296 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 C11orf71Q6IPW1 123 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 NANOGNBQ7Z5D8 188 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 CCDC36Q8IYA8 594 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 FITM2Q8N6M3 262 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 RBM15BQ8NDT2 890 aaKnown RBP13.21□□□□□ -0.29
ATG4B-215ENST00000468018 PERPQ96FX8 193 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 ZNF75AQ96N20 296 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 SLC38A2Q96QD8 506 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 MRPL13Q9BYD1 178 aaKnown RBP13.21□□□□□ -0.29
ATG4B-215ENST00000468018 ANKRD19PQ9H560 264 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 MOV10Q9HCE1 1003 aaKnown RBP13.21□□□□□ -0.29
ATG4B-215ENST00000468018 B3GNT2Q9NY97 397 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 ZNF224Q9NZL3 707 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 EGFL7Q9UHF1 273 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 RPS6KA6Q9UK32 745 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 HIF3AQ9Y2N7 669 aa13.21□□□□□ -0.29
ATG4B-215ENST00000468018 CR1P17927 2039 aa13.2□□□□□ -0.3
ATG4B-215ENST00000468018 ZNF726A6NNF4 738 aa13.2□□□□□ -0.3
ATG4B-215ENST00000468018 CENPBD1B2RD01 187 aa13.2□□□□□ -0.3
ATG4B-215ENST00000468018 FAM107AO95990 144 aa13.2□□□□□ -0.3
ATG4B-215ENST00000468018 UMPSP11172 480 aa13.2□□□□□ -0.3
ATG4B-215ENST00000468018 TTKP33981 857 aa13.2□□□□□ -0.3
ATG4B-215ENST00000468018 YAP1P46937 504 aaKnown RBP13.2□□□□□ -0.3
ATG4B-215ENST00000468018 ZNF133P52736 654 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-215ENST00000468018 UBE2NP61088 152 aaKnown RBP13.2□□□□□ -0.3
ATG4B-215ENST00000468018 PRKCDQ05655 676 aa13.2□□□□□ -0.3
ATG4B-215ENST00000468018 CARD17Q5XLA6 110 aa13.2□□□□□ -0.3
ATG4B-215ENST00000468018 ZNF544Q6NX49 715 aa13.2□□□□□ -0.3
ATG4B-215ENST00000468018 LRFN4Q6PJG9 635 aa13.2□□□□□ -0.3
ATG4B-215ENST00000468018 SLC22A25Q6T423 547 aa13.2□□□□□ -0.3
ATG4B-215ENST00000468018 MYPOPQ86VE0 399 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-215ENST00000468018 RNF113BQ8IZP6 322 aaKnown RBP13.2□□□□□ -0.3
ATG4B-215ENST00000468018 LRRC75AQ8NAA5 344 aa13.2□□□□□ -0.3
ATG4B-215ENST00000468018 FAM162AQ96A26 154 aa13.2□□□□□ -0.3
ATG4B-215ENST00000468018 SLC25A44Q96H78 314 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-215ENST00000468018 C7orf34Q96L11 122 aa13.2□□□□□ -0.3
ATG4B-215ENST00000468018 KATNB1Q9BVA0 655 aa13.2□□□□□ -0.3
ATG4B-215ENST00000468018 B3GAT2Q9NPZ5 323 aa13.2□□□□□ -0.3
ATG4B-215ENST00000468018 FAIMQ9NVQ4 179 aa13.2□□□□□ -0.3
ATG4B-215ENST00000468018 GLTPQ9NZD2 209 aa13.2□□□□□ -0.3
ATG4B-215ENST00000468018 ENPP4Q9Y6X5 453 aa13.2□□□□□ -0.3
ATG4B-215ENST00000468018 A0A087WUU8 490 aa13.19□□□□□ -0.3
ATG4B-215ENST00000468018 ATP6V1G2-DDX39BF2Z307 99 aa13.19□□□□□ -0.3
ATG4B-215ENST00000468018 BLOC1S5-TXNDC5H3BN57 136 aa13.19□□□□□ -0.3
ATG4B-215ENST00000468018 SERPINI2O75830 405 aa13.19□□□□□ -0.3
ATG4B-215ENST00000468018 HIST1H2ABP04908 130 aa13.19□□□□□ -0.3
ATG4B-215ENST00000468018 CECR9P0C854 216 aa13.19□□□□□ -0.3
ATG4B-215ENST00000468018 CBR1P16152 277 aa13.19□□□□□ -0.3
ATG4B-215ENST00000468018 IFNA8P32881 189 aa13.19□□□□□ -0.3
ATG4B-215ENST00000468018 AQP2P41181 271 aa13.19□□□□□ -0.3
ATG4B-215ENST00000468018 CSNK1A1P48729 337 aa13.19□□□□□ -0.3
ATG4B-215ENST00000468018 TUBA1BP68363 451 aa13.19□□□□□ -0.3
ATG4B-215ENST00000468018 TUBA4AP68366 448 aa13.19□□□□□ -0.3
ATG4B-215ENST00000468018 NAAAQ02083 359 aa13.19□□□□□ -0.3
ATG4B-215ENST00000468018 RUNX1T1Q06455 604 aa13.19□□□□□ -0.3
ATG4B-215ENST00000468018 MELKQ14680 651 aa13.19□□□□□ -0.3
ATG4B-215ENST00000468018 TRAM2Q15035 370 aa13.19□□□□□ -0.3
ATG4B-215ENST00000468018 SPATS1Q496A3 300 aa13.19□□□□□ -0.3
ATG4B-215ENST00000468018 SAMD4BQ5PRF9 694 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms