RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 ARIH2OSQ8N7S6 290 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 SLAMF7Q9NQ25 335 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 YARS2Q9Y2Z4 477 aaKnown RBP12.63□□□□□ -0.39
BRAT1-203ENST00000467558 IGHV5-51A0A0C4DH38 117 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 A0A1W2PQF6 199 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 MEIOCA2RUB1 952 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 SLC2A10O95528 541 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 FASLGP48023 281 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 AGERQ15109 404 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 UBE2NLQ5JXB2 153 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 KIRREL2Q6UWL6 708 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 TMEM178AQ8NBL3 297 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 ARSGQ96EG1 525 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 RADILQ96JH8 1075 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 ANKRD10Q9NXR5 420 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 CAMK2AQ9UQM7 478 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 EMC9Q9Y3B6 208 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 FAM230AA0A1W2PPH8 454 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 ANKRD30BLA7E2S9 258 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 PRKNO60260 465 aaPredicted RBP12.62□□□□□ -0.39
BRAT1-203ENST00000467558 PRAMEF4O60810 478 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 AKR7A3O95154 331 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 MYF5P13349 255 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 IFNGR1P15260 489 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 RPS19P39019 145 aaKnown RBP12.62□□□□□ -0.39
BRAT1-203ENST00000467558 GABREP78334 506 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 PRAMEF9Q5VWM5 478 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 LRRC18Q8N456 261 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 OR5L1Q8NGL2 311 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 OR2T35Q8NGX2 323 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 CHPT1Q8WUD6 406 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 TTC9Q92623 222 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 ISYNA1Q9NPH2 558 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 MUTYHQ9UIF7 546 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 PCOLCE2Q9UKZ9 415 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 SPI1P17947 270 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 HTR5AP47898 357 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 CCL7P80098 99 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 ACKR1Q16570 336 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 LIPNQ5VXI9 398 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 PRSS41Q7RTY9 318 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 LINC00346Q8IVM7 164 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 OR13C9Q8NGT0 318 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 IP6K3Q96PC2 410 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 TWSG1Q9GZX9 223 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 CHST11Q9NPF2 352 aa12.62□□□□□ -0.39
BRAT1-203ENST00000467558 SURF4O15260 269 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 UBL3O95164 117 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 UBCP0CG48 685 aaKnown RBP12.61□□□□□ -0.39
BRAT1-203ENST00000467558 HMGA2P52926 109 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 RNF4P78317 190 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 MFAP5Q13361 173 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 MEF2DQ14814 521 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 AGAP6Q5VW22 663 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 SSX6Q7RTT6 188 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 SNAPC3Q92966 411 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 AGAP4Q96P64 663 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 WWTR1Q9GZV5 400 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 NOSIPQ9Y314 301 aaKnown RBP12.61□□□□□ -0.39
BRAT1-203ENST00000467558 TRBV5-3A0A0A0MS03 114 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 ZSCAN5BA6NJL1 495 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 CLEC2LP0C7M8 214 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 GIFP27352 417 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 CD34P28906 385 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 EMDP50402 254 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 RPL18Q07020 188 aaKnown RBP12.61□□□□□ -0.39
BRAT1-203ENST00000467558 MTFR2Q6P444 385 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 TMEM99Q8N816 258 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 CNEP1R1Q8N9A8 125 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 GPR32P1Q8NGA4 272 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 OR1N1Q8NGS0 311 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 PRRT1Q99946 306 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 ARL6Q9H0F7 186 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 COA3Q9Y2R0 106 aaPredicted RBP12.61□□□□□ -0.39
BRAT1-203ENST00000467558 F5H0A9 414 aaPredicted RBP12.61□□□□□ -0.39
BRAT1-203ENST00000467558 HOXB9P17482 250 aaPredicted RBP12.61□□□□□ -0.39
BRAT1-203ENST00000467558 BDKRB2P30411 391 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 ATP1B3P54709 279 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 PCBP3P57721 371 aaKnown RBP12.61□□□□□ -0.39
BRAT1-203ENST00000467558 ZNF628Q5EBL2 1059 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 C8orf82Q6P1X6 216 aaPredicted RBP12.61□□□□□ -0.39
BRAT1-203ENST00000467558 PXKQ7Z7A4 578 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 STEAP2Q8NFT2 490 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 RDH8Q9NYR8 311 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 KCNIP1Q9NZI2 227 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 F10P00742 488 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 CELA2BP08218 269 aaPredicted RBP12.61□□□□□ -0.39
BRAT1-203ENST00000467558 APEX1P27695 318 aaKnown RBP12.61□□□□□ -0.39
BRAT1-203ENST00000467558 CLDN12P56749 244 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 HSF1Q00613 529 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 SELENBP1Q13228 472 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 FGFBP1Q14512 234 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 GNMTQ14749 295 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 CCDC58Q4VC31 144 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 GSG1LQ6UXU4 331 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 NRARPQ7Z6K4 114 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 OR4N2Q8NGD1 307 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 LGALS14Q8TCE9 139 aa12.61□□□□□ -0.39
BRAT1-203ENST00000467558 THOC3Q96J01 351 aaKnown RBP12.61□□□□□ -0.39
BRAT1-203ENST00000467558 SGCZQ96LD1 299 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms