RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 ODC1P11926 461 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 TCN1P20061 433 aaPredicted RBP4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 PRPS1L1P21108 318 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 IVDP26440 423 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 PSMB4P28070 264 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 TLX1P31314 330 aaPredicted RBP4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 OPRD1P41143 372 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 EIF1P41567 113 aaKnown RBP4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 ALDH3B1P43353 468 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 MAGEA4P43358 317 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 BRCC3P46736 316 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 NKX2-5P52952 324 aaPredicted RBP4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 CLDN15P56746 228 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 FOLH1Q04609 750 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 ELAVL2Q12926 359 aaKnown RBP4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 TNK1Q13470 666 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 TMEM187Q14656 261 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 MESDQ14696 234 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 OXA1LQ15070 435 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 SSX2Q16385 188 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 GOLGA7BQ2TAP0 167 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 FAM91A1Q658Y4 838 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 SLC8B1Q6J4K2 584 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 C16orf47Q6ZP98 133 aaPredicted RBP4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 FAM183BPQ6ZVS7 135 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 ZNF767PQ75MW2 155 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 STRADAQ7RTN6 431 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 FAM131BQ86XD5 332 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 TIGD4Q8IY51 512 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 THEM5Q8N1Q8 247 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 CENPSQ8N2Z9 138 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 FBXW8Q8N3Y1 598 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 SNX31Q8N9S9 440 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 OR10T2Q8NGX3 314 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 ZNF671Q8TAW3 534 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 PNPT1Q8TCS8 783 aaKnown RBP4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 ECHDC3Q96DC8 303 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 LGALS12Q96DT0 336 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 PGM2Q96G03 612 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 MS4A14Q96JA4 679 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 LRR1Q96L50 414 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 MCEEQ96PE7 176 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 NPY6RQ99463 290 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 PELOQ9BRX2 385 aaKnown RBP4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 ZSCAN5AQ9BUG6 496 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 GPR174Q9BXC1 333 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 BCL2L14Q9BZR8 327 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 OR52A5Q9H2C5 316 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 OR51M1Q9H341 326 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 EXO5Q9H790 373 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 COPS7BQ9H9Q2 264 aaPredicted RBP4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 RAB9BQ9NP90 201 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 PPANQ9NQ55 473 aaKnown RBP4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 SPHK2Q9NRA0 654 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 ZNF275Q9NSD4 429 aaPredicted RBP4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 SLC12A6Q9UHW9 1150 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 BTNL2Q9UIR0 455 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 ABCG2Q9UNQ0 655 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 KCNK7Q9Y2U2 307 aa4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 TDRKHQ9Y2W6 561 aaKnown RBP4.3□□□□□ -1.72
CACNA1C-223ENST00000465278 IGHV4-4A0A075B6R2 117 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 hCG_1818297A0A087WSY0 165 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 SERTM2A0A1B0GWG4 89 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 RAB19A4D1S5 217 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 CCRL2O00421 344 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 DNALI1O14645 258 aaPredicted RBP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 PRRG1O14668 218 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 ABCD4O14678 606 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 KLF11O14901 512 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 TM9SF1O15321 606 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 TOX3O15405 576 aaPredicted RBP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 RAD51CO43502 376 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 B4GAT1O43505 415 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 AP2A2O94973 939 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 PAK4O96013 591 aaPredicted RBP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 CSTAP01040 98 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 FGGP02679 453 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 APOHP02749 345 aaPredicted RBP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 RBP1P09455 135 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 SBK2P0C263 348 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 ZDHHC11BP0C7U3 371 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 LINC00614P0C842 121 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 UMPSP11172 480 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 CD36P16671 472 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 KDELR1P24390 212 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 MIPP30301 263 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 CHRNA3P32297 505 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 UGT2B10P36537 528 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 CDKN2BP42772 138 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 SLC1A3P43003 542 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 CDKN1BP46527 198 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 GLIPR1P48060 266 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 MEOX2P50222 304 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 NR0B1P51843 470 aaKnown RBP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 CASP9P55211 416 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 YBEYP58557 167 aaPredicted RBP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 DAOAP59103 153 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 ABRQ12979 859 aa4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 KRR1Q13601 381 aaKnown RBP4.29□□□□□ -1.72
CACNA1C-223ENST00000465278 RBM39Q14498 530 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms