RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 TTC23Q5W5X9 447 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 DGAT2L7PQ6IED9 249 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 ZNF770Q6IQ21 691 aaPredicted RBP6.61□□□□□ -1.35
UBE4B-204ENST00000462658 ZNF613Q6PF04 617 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 ZNF474Q6S9Z5 364 aaPredicted RBP6.61□□□□□ -1.35
UBE4B-204ENST00000462658 RRM2BQ7LG56 351 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 NUP54Q7Z3B4 507 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 MARCH3Q86UD3 253 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 NKAIN4Q8IVV8 208 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 MARVELD2Q8N4S9 558 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 GATSQ8NAP1 163 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 POGLUT1Q8NBL1 392 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 AQP11Q8NBQ7 271 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 OR4K5Q8NGD3 323 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 SLC22A8Q8TCC7 542 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 HGDQ93099 445 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 TMCO6Q96DC7 493 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 NR1H4Q96RI1 486 aaPredicted RBP6.61□□□□□ -1.35
UBE4B-204ENST00000462658 MBOAT4Q96T53 435 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 NIPSNAP1Q9BPW8 284 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 ANKRD60Q9BZ19 345 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 TBL1XR1Q9BZK7 514 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 LAT2Q9GZY6 243 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 RIBC2Q9H4K1 309 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 EXOSC3Q9NQT5 275 aaKnown RBP6.61□□□□□ -1.35
UBE4B-204ENST00000462658 PAPOLBQ9NRJ5 636 aaKnown RBP6.61□□□□□ -1.35
UBE4B-204ENST00000462658 P4HTMQ9NXG6 502 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 RPS6KB2Q9UBS0 482 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 FBXL4Q9UKA2 621 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 SLC7A7Q9UM01 511 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 MGAT4BQ9UQ53 548 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 POFUT2Q9Y2G5 429 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 MRPS18BQ9Y676 258 aaKnown RBP6.61□□□□□ -1.35
UBE4B-204ENST00000462658 CACNA1BQ00975 2339 aa6.61□□□□□ -1.35
UBE4B-204ENST00000462658 LOC100130705A0A1B0GUX0 176 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 A0A1B0GWA3 101 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 ZNF264O43296 627 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 EIF4E2O60573 245 aaKnown RBP6.6□□□□□ -1.35
UBE4B-204ENST00000462658 LYPD3O95274 346 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 CLIC3O95833 236 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 ANGPTL1O95841 491 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 ADAP00813 363 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 GNAO1P09471 354 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 LINGO3P0C6S8 592 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 MYF6P23409 242 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 EVI2BP34910 448 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 POLR2IP36954 125 aaKnown RBP6.6□□□□□ -1.35
UBE4B-204ENST00000462658 IFNGR2P38484 337 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 TMED10P49755 219 aaKnown RBP6.6□□□□□ -1.35
UBE4B-204ENST00000462658 UGT2B15P54855 530 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 FBXW4P57775 412 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 COPZ1P61923 177 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 NPRL3Q12980 569 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 SKP2Q13309 424 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 ZNF730Q6ZMV8 503 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 ZER1Q7Z7L7 766 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 RPS19BP1Q86WX3 136 aaKnown RBP6.6□□□□□ -1.35
UBE4B-204ENST00000462658 RAB43Q86YS6 212 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 APLFQ8IW19 511 aaPredicted RBP6.6□□□□□ -1.35
UBE4B-204ENST00000462658 CHERPQ8IWX8 916 aaKnown RBP6.6□□□□□ -1.35
UBE4B-204ENST00000462658 CADM2Q8N3J6 435 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 TMCO5AQ8N6Q1 288 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 LSMEM1Q8N8F7 131 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 EXD3Q8N9H8 876 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 ADPRHL1Q8NDY3 354 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 FAM71CQ8NEG0 241 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 PIGXQ8TBF5 258 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 GNPDA2Q8TDQ7 276 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 GRHL3Q8TE85 626 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 TMEM255BQ8WV15 326 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 ACOT11Q8WXI4 607 aaPredicted RBP6.6□□□□□ -1.35
UBE4B-204ENST00000462658 KIAA1143Q96AT1 154 aaPredicted RBP6.6□□□□□ -1.35
UBE4B-204ENST00000462658 ARSGQ96EG1 525 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 MUS81Q96NY9 551 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 NODALQ96S42 347 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 RASL10BQ96S79 203 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 DGCR6LQ9BY27 220 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 RTN4RQ9BZR6 473 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 UCK2Q9BZX2 261 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 MOV10Q9HCE1 1003 aaKnown RBP6.6□□□□□ -1.35
UBE4B-204ENST00000462658 ASCL3Q9NQ33 180 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 UBAP1Q9NZ09 502 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 SELENONQ9NZV5 590 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 IL17BQ9UHF5 180 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 KLK13Q9UKR3 277 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 CARD8Q9Y2G2 431 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 YARS2Q9Y2Z4 477 aaKnown RBP6.6□□□□□ -1.35
UBE4B-204ENST00000462658 PKD1L2Q7Z442 2459 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 CCDC88CQ9P219 2028 aa6.6□□□□□ -1.35
UBE4B-204ENST00000462658 DSPP15924 2871 aaKnown RBP6.59□□□□□ -1.35
UBE4B-204ENST00000462658 A0A0B4J2E0 115 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 A0A1B0GX12 115 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 DNAJC9-AS1A6NH13 148 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 TP53I11O14683 189 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 BCKDKO14874 412 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 HCRTR2O43614 444 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 CHP2O43745 196 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 SCO2O43819 266 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 NTN1O95631 604 aa6.59□□□□□ -1.35
UBE4B-204ENST00000462658 SERPINA7P05543 415 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms