RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 ZDHHC13Q8IUH4 622 aa16.97■□□□□ 0.31
XPA-202ENST00000462523 GABRG1Q8N1C3 465 aa16.97■□□□□ 0.31
XPA-202ENST00000462523 SLCO5A1Q9H2Y9 848 aa16.97■□□□□ 0.31
XPA-202ENST00000462523 TXNIPQ9H3M7 391 aa16.97■□□□□ 0.31
XPA-202ENST00000462523 SMURF2Q9HAU4 748 aa16.97■□□□□ 0.31
XPA-202ENST00000462523 KCNJ16Q9NPI9 418 aa16.97■□□□□ 0.31
XPA-202ENST00000462523 NRIP3Q9NQ35 241 aa16.97■□□□□ 0.31
XPA-202ENST00000462523 NPDC1Q9NQX5 325 aaPredicted RBP16.97■□□□□ 0.31
XPA-202ENST00000462523 GALNT8Q9NY28 637 aa16.97■□□□□ 0.31
XPA-202ENST00000462523 IL20Q9NYY1 176 aa16.97■□□□□ 0.31
XPA-202ENST00000462523 MALT1Q9UDY8 824 aa16.97■□□□□ 0.31
XPA-202ENST00000462523 FOXD3Q9UJU5 478 aaPredicted RBP16.97■□□□□ 0.31
XPA-202ENST00000462523 ZNF346Q9UL40 294 aaKnown RBP16.97■□□□□ 0.31
XPA-202ENST00000462523 CDH10Q9Y6N8 788 aa16.97■□□□□ 0.31
XPA-202ENST00000462523 A0A1W2PRG6 482 aa16.96■□□□□ 0.31
XPA-202ENST00000462523 UPK3AO75631 287 aa16.96■□□□□ 0.31
XPA-202ENST00000462523 BCL10O95999 233 aa16.96■□□□□ 0.31
XPA-202ENST00000462523 CD14P08571 375 aa16.96■□□□□ 0.31
XPA-202ENST00000462523 ANXA8P13928 327 aa16.96■□□□□ 0.31
XPA-202ENST00000462523 RPL4P36578 427 aaKnown RBP16.96■□□□□ 0.31
XPA-202ENST00000462523 FOXG1P55316 489 aaPredicted RBP16.96■□□□□ 0.31
XPA-202ENST00000462523 TOP3AQ13472 1001 aaPredicted RBP16.96■□□□□ 0.31
XPA-202ENST00000462523 CAMK2DQ13557 499 aa16.96■□□□□ 0.31
XPA-202ENST00000462523 RCN1Q15293 331 aa16.96■□□□□ 0.31
XPA-202ENST00000462523 CARD17Q5XLA6 110 aa16.96■□□□□ 0.31
XPA-202ENST00000462523 FBXW9Q5XUX1 488 aa16.96■□□□□ 0.31
XPA-202ENST00000462523 SVOPLQ8N434 492 aa16.96■□□□□ 0.31
XPA-202ENST00000462523 ATG16L2Q8NAA4 619 aa16.96■□□□□ 0.31
XPA-202ENST00000462523 OR6X1Q8NH79 312 aa16.96■□□□□ 0.31
XPA-202ENST00000462523 ZNF519Q8TB69 540 aa16.96■□□□□ 0.31
XPA-202ENST00000462523 USP9YO00507 2555 aaPredicted RBP16.96■□□□□ 0.31
XPA-202ENST00000462523 C19orf84I3L1E1 186 aa16.95■□□□□ 0.3
XPA-202ENST00000462523 PGA4P0DJD7 388 aa16.95■□□□□ 0.3
XPA-202ENST00000462523 PGA3P0DJD8 388 aa16.95■□□□□ 0.3
XPA-202ENST00000462523 GSTM3P21266 225 aa16.95■□□□□ 0.3
XPA-202ENST00000462523 DAP3P51398 398 aaKnown RBP16.95■□□□□ 0.3
XPA-202ENST00000462523 RPL27P61353 136 aaKnown RBP16.95■□□□□ 0.3
XPA-202ENST00000462523 COX10Q12887 443 aa16.95■□□□□ 0.3
XPA-202ENST00000462523 Q6ZT83 130 aa16.95■□□□□ 0.3
XPA-202ENST00000462523 CLDN22Q8N7P3 220 aa16.95■□□□□ 0.3
XPA-202ENST00000462523 Q96M85 177 aa16.95■□□□□ 0.3
XPA-202ENST00000462523 CIB1Q99828 191 aa16.95■□□□□ 0.3
XPA-202ENST00000462523 RBM24Q9BX46 236 aaKnown RBP16.95■□□□□ 0.3
XPA-202ENST00000462523 POLDIP3Q9BY77 421 aaKnown RBP16.95■□□□□ 0.3
XPA-202ENST00000462523 MRPL13Q9BYD1 178 aaKnown RBP16.95■□□□□ 0.3
XPA-202ENST00000462523 TMEFF2Q9UIK5 374 aaPredicted RBP16.95■□□□□ 0.3
XPA-202ENST00000462523 H0YHG0 523 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 PPP1R3DO95685 299 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 BAG2O95816 211 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 ANPEPP15144 967 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 CCKARP32238 428 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 PPP2R2BQ00005 443 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 FAM27E3Q08E93 113 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 SLC36A3Q495N2 470 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 CLEC12AQ5QGZ9 265 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 KDM4DQ6B0I6 523 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 DPY19L2P2Q6ZN68 376 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 BEND4Q6ZU67 534 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 C20orf196Q8IYI0 205 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 HDAC2Q92769 488 aaKnown RBP16.94■□□□□ 0.3
XPA-202ENST00000462523 RASD2Q96D21 266 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 SLC25A44Q96H78 314 aaPredicted RBP16.94■□□□□ 0.3
XPA-202ENST00000462523 ADAD1Q96M93 576 aaKnown RBP16.94■□□□□ 0.3
XPA-202ENST00000462523 ALKBH3Q96Q83 286 aaPredicted RBP16.94■□□□□ 0.3
XPA-202ENST00000462523 BHLHE40O14503 412 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 AKAP8O43823 692 aaKnown RBP16.94■□□□□ 0.3
XPA-202ENST00000462523 MITFO75030 526 aaPredicted RBP16.94■□□□□ 0.3
XPA-202ENST00000462523 SLC43A1O75387 559 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 TRMUO75648 421 aaKnown RBP16.94■□□□□ 0.3
XPA-202ENST00000462523 CNOT4O95628 575 aaKnown RBP16.94■□□□□ 0.3
XPA-202ENST00000462523 IGHV1-2P23083 117 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 FAPQ12884 760 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 MESTQ5EB52 335 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 STAC2Q6ZMT1 411 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 UBE2J2Q8N2K1 259 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 RNASE6Q93091 150 aaKnown RBP16.94■□□□□ 0.3
XPA-202ENST00000462523 ZNF837Q96EG3 531 aaPredicted RBP16.94■□□□□ 0.3
XPA-202ENST00000462523 LINC00470Q9BZP3 86 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 KIF17Q9P2E2 1029 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 IER3IP1Q9Y5U9 82 aa16.94■□□□□ 0.3
XPA-202ENST00000462523 SPTAN1Q13813 2472 aaKnown RBP16.93■□□□□ 0.3
XPA-202ENST00000462523 TEX13CA0A0J9YWL9 993 aa16.93■□□□□ 0.3
XPA-202ENST00000462523 A1L4Q6 167 aa16.93■□□□□ 0.3
XPA-202ENST00000462523 ZNF726A6NNF4 738 aa16.93■□□□□ 0.3
XPA-202ENST00000462523 ITGA5P08648 1049 aa16.93■□□□□ 0.3
XPA-202ENST00000462523 ACADSP16219 412 aa16.93■□□□□ 0.3
XPA-202ENST00000462523 COX5AP20674 150 aa16.93■□□□□ 0.3
XPA-202ENST00000462523 SDHAP31040 664 aa16.93■□□□□ 0.3
XPA-202ENST00000462523 SLC6A6P31641 620 aa16.93■□□□□ 0.3
XPA-202ENST00000462523 TAF11Q15544 211 aa16.93■□□□□ 0.3
XPA-202ENST00000462523 TSC22D1Q15714 1073 aa16.93■□□□□ 0.3
XPA-202ENST00000462523 HIST3H3Q16695 136 aa16.93■□□□□ 0.3
XPA-202ENST00000462523 CXorf67Q86X51 503 aaPredicted RBP16.93■□□□□ 0.3
XPA-202ENST00000462523 ARIH2OSQ8N7S6 290 aa16.93■□□□□ 0.3
XPA-202ENST00000462523 POMGNT2Q8NAT1 580 aa16.93■□□□□ 0.3
XPA-202ENST00000462523 OR4Q3Q8NH05 313 aa16.93■□□□□ 0.3
XPA-202ENST00000462523 TMEM54Q969K7 222 aa16.93■□□□□ 0.3
XPA-202ENST00000462523 ZNF566Q969W8 418 aa16.93■□□□□ 0.3
XPA-202ENST00000462523 LRR1Q96L50 414 aa16.93■□□□□ 0.3
XPA-202ENST00000462523 KCNK17Q96T54 332 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms