RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 NEDD8-MDP1E9PL57 170 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 K7EQS6 105 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 EEF2KO00418 725 aaKnown RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 ABCD4O14678 606 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 TBL1XO60907 577 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 SCN2BO60939 215 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 CSO75390 466 aaKnown RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 SAP30O75446 220 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 IGLV3-19P01714 112 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 KRT6AP02538 564 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 APODP05090 189 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 ANXA5P08758 320 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 CCL2P13500 99 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 GNSP15586 552 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 NQO2P16083 231 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 GOT1P17174 413 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 GIFP27352 417 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 FDFT1P37268 417 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 FEN1P39748 380 aaKnown RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 SOX3P41225 446 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 CDKN2CP42773 168 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 RPS5P46782 204 aaKnown RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 CDC34P49427 236 aaPredicted RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 SERPINB9P50453 376 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 CCNG1P51959 295 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 RAP1GDS1P52306 607 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 RGS8P57771 180 aaPredicted RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 RPL26P61254 145 aaKnown RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 GNG11P61952 73 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 RPS24P62847 133 aaKnown RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 CSNK1G2P78368 415 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 CDK16Q00536 496 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 CSTF1Q05048 431 aaKnown RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 ZFP36L1Q07352 338 aaKnown RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 HSPB3Q12988 150 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 NDUFA5Q16718 116 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 PCK2Q16822 640 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 CDO1Q16878 200 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 ZNF528Q3MIS6 628 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.3□□□□□ -1.88
UBA3-204ENST00000461522 NKAIN2Q5VXU1 208 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 SEL1L3Q68CR1 1132 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 TXNRD3NBQ6F5E7 133 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 PYHIN1Q6K0P9 492 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 PRR27Q6MZM9 219 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 MFSD12Q6NUT3 480 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 RWDD4Q6NW29 188 aaKnown RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 FAM198BQ6UWH4 519 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 TMEM182Q6ZP80 229 aaPredicted RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 SLC13A5Q86YT5 568 aaPredicted RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 MICU2Q8IYU8 434 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 IQCKQ8N0W5 287 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 CCDC185Q8N715 623 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 PQLC3Q8N755 202 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 OR5T2Q8NGG2 359 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 GPX8Q8TED1 209 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 P3H4Q92791 437 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 ST6GALNAC6Q969X2 333 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 MRGPRFQ96AM1 343 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 FAM131CQ96AQ9 280 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 AP2M1Q96CW1 435 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 CNRIP1Q96F85 164 aaPredicted RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 ZNF641Q96N77 438 aaPredicted RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 OLFM3Q96PB7 478 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 CCNL2Q96S94 520 aaPredicted RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 SEPHS2Q99611 448 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 MAP3K3Q99759 626 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 SPAG8Q99932 426 aaPredicted RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 CCDC3Q9BQI4 270 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 ANKRD60Q9BZ19 345 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 IL22Q9GZX6 179 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 OPN3Q9H1Y3 402 aaPredicted RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 PARLQ9H300 379 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 TMEM231Q9H6L2 316 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 ASB8Q9H765 288 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 NOL11Q9H8H0 719 aaKnown RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 Q9H8V8 135 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 ROPN1Q9HAT0 212 aaPredicted RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 MYNNQ9NPC7 610 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 ZCCHC3Q9NUD5 404 aaKnown RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 WARS2Q9UGM6 360 aaKnown RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 IL17BQ9UHF5 180 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 PYCARDQ9ULZ3 195 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 SPATA2Q9UM82 520 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 RPL26L1Q9UNX3 145 aaKnown RBP3.3□□□□□ -1.88
UBA3-204ENST00000461522 LRRC42Q9Y546 428 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 SAR1BQ9Y6B6 198 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 R4GN57 208 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 V9GYQ6 96 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 HCFC1P51610 2035 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 KIAA1671Q9BY89 1806 aa3.3□□□□□ -1.88
UBA3-204ENST00000461522 DOCK8Q8NF50 2099 aa3.29□□□□□ -1.88
UBA3-204ENST00000461522 EYSQ5T1H1 3165 aa3.29□□□□□ -1.88
UBA3-204ENST00000461522 GBF1Q92538 1859 aa3.29□□□□□ -1.88
UBA3-204ENST00000461522 MUC3AQ02505 3323 aa3.29□□□□□ -1.88
UBA3-204ENST00000461522 A0A0D9SEW6 157 aa3.29□□□□□ -1.88
UBA3-204ENST00000461522 TRBV5-5A0A0J9YX44 114 aa3.29□□□□□ -1.88
UBA3-204ENST00000461522 RAB19A4D1S5 217 aa3.29□□□□□ -1.88
UBA3-204ENST00000461522 ANKDD1BA6NHY2 528 aa3.29□□□□□ -1.88
UBA3-204ENST00000461522 KLLNB2CW77 178 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms