RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 QSOX2Q6ZRP7 698 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 ZNF595Q8IYB9 648 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 UXS1Q8NBZ7 420 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 OR5J2Q8NH18 312 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 FLVCR1-AS1Q8TAF5 88 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 SCMH1Q96GD3 660 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 SMIM10Q96HG1 83 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 FUZQ9BT04 418 aa14.09□□□□□ -0.15
LMNB1-203ENST00000460265 MRPS17Q9Y2R5 130 aaKnown RBP14.09□□□□□ -0.15
LMNB1-203ENST00000460265 SIRT4Q9Y6E7 314 aaPredicted RBP14.09□□□□□ -0.15
LMNB1-203ENST00000460265 SPTBN5Q9NRC6 3674 aaKnown RBP14.08□□□□□ -0.16
LMNB1-203ENST00000460265 SIGLEC6O43699 453 aa14.08□□□□□ -0.16
LMNB1-203ENST00000460265 SIX6O95475 246 aa14.08□□□□□ -0.16
LMNB1-203ENST00000460265 RGS7BPQ6MZT1 257 aaPredicted RBP14.08□□□□□ -0.16
LMNB1-203ENST00000460265 ZNF613Q6PF04 617 aa14.08□□□□□ -0.16
LMNB1-203ENST00000460265 ABHD4Q8TB40 342 aa14.08□□□□□ -0.16
LMNB1-203ENST00000460265 THAP4Q8WY91 577 aa14.08□□□□□ -0.16
LMNB1-203ENST00000460265 CNN2Q99439 309 aaKnown RBP14.08□□□□□ -0.16
LMNB1-203ENST00000460265 SLC19A3Q9BZV2 496 aa14.08□□□□□ -0.16
LMNB1-203ENST00000460265 MED17Q9NVC6 651 aa14.08□□□□□ -0.16
LMNB1-203ENST00000460265 TUBAL3A6NHL2 446 aa14.08□□□□□ -0.16
LMNB1-203ENST00000460265 ACOD1A6NK06 481 aa14.08□□□□□ -0.16
LMNB1-203ENST00000460265 FABP1P07148 127 aa14.08□□□□□ -0.16
LMNB1-203ENST00000460265 PLA1AQ53H76 456 aa14.08□□□□□ -0.16
LMNB1-203ENST00000460265 TCTE1Q5JU00 501 aa14.08□□□□□ -0.16
LMNB1-203ENST00000460265 HES5Q5TA89 166 aa14.08□□□□□ -0.16
LMNB1-203ENST00000460265 ZCCHC12Q6PEW1 402 aa14.08□□□□□ -0.16
LMNB1-203ENST00000460265 KDM8Q8N371 416 aa14.08□□□□□ -0.16
LMNB1-203ENST00000460265 C17orf47Q8NEP4 570 aa14.08□□□□□ -0.16
LMNB1-203ENST00000460265 BIN3Q9NQY0 253 aa14.08□□□□□ -0.16
LMNB1-203ENST00000460265 SERTAD3Q9UJW9 196 aa14.08□□□□□ -0.16
LMNB1-203ENST00000460265 DNASE2O00115 360 aaPredicted RBP14.07□□□□□ -0.16
LMNB1-203ENST00000460265 NKX2-2O95096 273 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 ECDO95905 644 aaPredicted RBP14.07□□□□□ -0.16
LMNB1-203ENST00000460265 DCNP07585 359 aaKnown RBP14.07□□□□□ -0.16
LMNB1-203ENST00000460265 ADRB1P08588 477 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 CD3GP09693 182 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 SNRPBP14678 240 aaKnown RBP14.07□□□□□ -0.16
LMNB1-203ENST00000460265 CAPZBP47756 277 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 NHLRC3Q5JS37 347 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 LNX2Q8N448 690 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 TRMT10AQ8TBZ6 339 aaKnown RBP14.07□□□□□ -0.16
LMNB1-203ENST00000460265 KLF2Q9Y5W3 355 aaPredicted RBP14.07□□□□□ -0.16
LMNB1-203ENST00000460265 PI4KAP42356 2102 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 FOXS1O43638 330 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 NMBP08949 121 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 H2AFB2P0C5Z0 115 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 TBXA2RP21731 343 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 RORAP35398 523 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 PLCXD2Q0VAA5 305 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 POGLUT1Q8NBL1 392 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 BVESQ8NE79 360 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 TINAGL1Q9GZM7 467 aaPredicted RBP14.07□□□□□ -0.16
LMNB1-203ENST00000460265 ZCCHC4Q9H5U6 513 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 C7orf66A4D0T2 115 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 C17orf51A8MQB3 221 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 IDSB3KWA1 339 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 GATBO75879 557 aaKnown RBP14.07□□□□□ -0.16
LMNB1-203ENST00000460265 ELK1P19419 428 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 ALG10Q5BKT4 473 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 MANEAQ5SRI9 462 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 C16orf47Q6ZP98 133 aaPredicted RBP14.07□□□□□ -0.16
LMNB1-203ENST00000460265 LINGO2Q7L985 606 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 ZNF676Q8N7Q3 588 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 OR14A2Q96R54 314 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 ESRP2Q9H6T0 727 aaKnown RBP14.07□□□□□ -0.16
LMNB1-203ENST00000460265 ING1Q9UK53 422 aaPredicted RBP14.07□□□□□ -0.16
LMNB1-203ENST00000460265 MRTO4Q9UKD2 239 aaKnown RBP14.07□□□□□ -0.16
LMNB1-203ENST00000460265 ATXN7L1Q9ULK2 861 aaPredicted RBP14.07□□□□□ -0.16
LMNB1-203ENST00000460265 GVINP1Q7Z2Y8 2422 aa14.07□□□□□ -0.16
LMNB1-203ENST00000460265 TMEM72A0PK05 275 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 FLRT2O43155 660 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 DOK2O60496 412 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 ATG12O94817 140 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 FBXO45P0C2W1 286 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 CCR6P51684 374 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 PSMD4P55036 377 aaKnown RBP14.06□□□□□ -0.16
LMNB1-203ENST00000460265 SFRP5Q5T4F7 317 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 PDZD9Q8IXQ8 264 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 SLC35F2Q8IXU6 374 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 CCDC36Q8IYA8 594 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 TOMM5Q8N4H5 51 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 HGDQ93099 445 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 MS4A3Q96HJ5 214 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 UBQLN4Q9NRR5 601 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 DNAJB12Q9NXW2 375 aaKnown RBP14.06□□□□□ -0.16
LMNB1-203ENST00000460265 NUBP2Q9Y5Y2 271 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 MTCH2Q9Y6C9 303 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 MEIKINA0A087WXM9 373 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 A0A0B4J2E0 115 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 A0A1B0GX12 115 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 A8MXK9 166 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 OR8G3PP0DMU2 310 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 CD27P26842 260 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 TACR3P29371 465 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 ST3GAL2Q16842 350 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 MARCH3Q86UD3 253 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 OR52N1Q8NH53 320 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 FAM174AQ8TBP5 190 aa14.06□□□□□ -0.16
LMNB1-203ENST00000460265 BRIX1Q8TDN6 353 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms