RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 A0A096LPE4 126 aa18.14■□□□□ 0.49
VARS-218ENST00000459667 A0A1W2PPZ6 126 aa18.14■□□□□ 0.49
VARS-218ENST00000459667 SHISA9B4DS77 424 aa18.14■□□□□ 0.49
VARS-218ENST00000459667 UBOX5O94941 541 aa18.14■□□□□ 0.49
VARS-218ENST00000459667 PRSS23O95084 383 aa18.14■□□□□ 0.49
VARS-218ENST00000459667 IFI30P13284 250 aa18.14■□□□□ 0.49
VARS-218ENST00000459667 CD40P25942 277 aa18.14■□□□□ 0.49
VARS-218ENST00000459667 MSX2P35548 267 aaPredicted RBP18.14■□□□□ 0.49
VARS-218ENST00000459667 UBE2NP61088 152 aaKnown RBP18.14■□□□□ 0.49
VARS-218ENST00000459667 RPL18Q07020 188 aaKnown RBP18.14■□□□□ 0.49
VARS-218ENST00000459667 MELKQ14680 651 aa18.14■□□□□ 0.49
VARS-218ENST00000459667 FAM86B1Q8N7N1 296 aa18.14■□□□□ 0.49
VARS-218ENST00000459667 OR6X1Q8NH79 312 aa18.14■□□□□ 0.49
VARS-218ENST00000459667 MAGEE2Q8TD90 523 aaPredicted RBP18.14■□□□□ 0.49
VARS-218ENST00000459667 LIPHQ8WWY8 451 aa18.14■□□□□ 0.49
VARS-218ENST00000459667 ZNF837Q96EG3 531 aaPredicted RBP18.14■□□□□ 0.49
VARS-218ENST00000459667 MUC13Q9H3R2 512 aa18.14■□□□□ 0.49
VARS-218ENST00000459667 V9GYQ6 96 aa18.14■□□□□ 0.49
VARS-218ENST00000459667 ALPK2Q86TB3 2170 aa18.14■□□□□ 0.49
VARS-218ENST00000459667 ARPC4-TTLL3A0A0A6YYG9 625 aa18.13■□□□□ 0.49
VARS-218ENST00000459667 HTR3EA5X5Y0 456 aa18.13■□□□□ 0.49
VARS-218ENST00000459667 ZNF99A8MXY4 864 aaPredicted RBP18.13■□□□□ 0.49
VARS-218ENST00000459667 SMPD2O60906 423 aa18.13■□□□□ 0.49
VARS-218ENST00000459667 STAMBPO95630 424 aa18.13■□□□□ 0.49
VARS-218ENST00000459667 AQP2P41181 271 aa18.13■□□□□ 0.49
VARS-218ENST00000459667 CSNK1A1P48729 337 aa18.13■□□□□ 0.49
VARS-218ENST00000459667 CDH11P55287 796 aa18.13■□□□□ 0.49
VARS-218ENST00000459667 LSM11P83369 360 aaKnown RBP eCLIP18.13■□□□□ 0.49
VARS-218ENST00000459667 SPOCK1Q08629 439 aa18.13■□□□□ 0.49
VARS-218ENST00000459667 DNAL1Q4LDG9 190 aa18.13■□□□□ 0.49
VARS-218ENST00000459667 TSEN54Q7Z6J9 526 aaKnown RBP18.13■□□□□ 0.49
VARS-218ENST00000459667 NRMQ8IXM6 262 aa18.13■□□□□ 0.49
VARS-218ENST00000459667 ACOT11Q8WXI4 607 aaPredicted RBP18.13■□□□□ 0.49
VARS-218ENST00000459667 MCUR1Q96AQ8 359 aa18.13■□□□□ 0.49
VARS-218ENST00000459667 BPIFA2Q96DR5 249 aa18.13■□□□□ 0.49
VARS-218ENST00000459667 PYURFQ96I23 114 aa18.13■□□□□ 0.49
VARS-218ENST00000459667 RADILQ96JH8 1075 aa18.13■□□□□ 0.49
VARS-218ENST00000459667 ULBP2Q9BZM5 246 aa18.13■□□□□ 0.49
VARS-218ENST00000459667 A0A1W2PRG6 482 aa18.12■□□□□ 0.49
VARS-218ENST00000459667 SEC14L2O76054 403 aa18.12■□□□□ 0.49
VARS-218ENST00000459667 BCL10O95999 233 aa18.12■□□□□ 0.49
VARS-218ENST00000459667 F13BP05160 661 aa18.12■□□□□ 0.49
VARS-218ENST00000459667 HOXB1P14653 301 aaPredicted RBP18.12■□□□□ 0.49
VARS-218ENST00000459667 ITGA2P17301 1181 aa18.12■□□□□ 0.49
VARS-218ENST00000459667 TUBA1BP68363 451 aa18.12■□□□□ 0.49
VARS-218ENST00000459667 TUBA4AP68366 448 aa18.12■□□□□ 0.49
VARS-218ENST00000459667 MTX3Q5HYI7 312 aa18.12■□□□□ 0.49
VARS-218ENST00000459667 SLC22A25Q6T423 547 aa18.12■□□□□ 0.49
VARS-218ENST00000459667 ZNF730Q6ZMV8 503 aa18.12■□□□□ 0.49
VARS-218ENST00000459667 TUBA1AQ71U36 451 aa18.12■□□□□ 0.49
VARS-218ENST00000459667 TMEM171Q8WVE6 324 aa18.12■□□□□ 0.49
VARS-218ENST00000459667 ANKRD19PQ9H560 264 aa18.12■□□□□ 0.49
VARS-218ENST00000459667 INIPQ9NRY2 104 aa18.12■□□□□ 0.49
VARS-218ENST00000459667 TAS2R1Q9NYW7 299 aa18.12■□□□□ 0.49
VARS-218ENST00000459667 NDUFAF4Q9P032 175 aa18.12■□□□□ 0.49
VARS-218ENST00000459667 POU2F3Q9UKI9 436 aa18.12■□□□□ 0.49
VARS-218ENST00000459667 A0A087WUU8 490 aa18.11■□□□□ 0.49
VARS-218ENST00000459667 MCIDASD6RGH6 385 aa18.11■□□□□ 0.49
VARS-218ENST00000459667 hCG_2039718K7EN88 272 aa18.11■□□□□ 0.49
VARS-218ENST00000459667 GYG2O15488 501 aa18.11■□□□□ 0.49
VARS-218ENST00000459667 SAGP10523 405 aaPredicted RBP18.11■□□□□ 0.49
VARS-218ENST00000459667 RHCEP18577 417 aa18.11■□□□□ 0.49
VARS-218ENST00000459667 PAX7P23759 505 aa18.11■□□□□ 0.49
VARS-218ENST00000459667 VLDLRP98155 873 aa18.11■□□□□ 0.49
VARS-218ENST00000459667 PRKCDQ05655 676 aa18.11■□□□□ 0.49
VARS-218ENST00000459667 RNF113BQ8IZP6 322 aaKnown RBP18.11■□□□□ 0.49
VARS-218ENST00000459667 DEPDC4Q8N2C3 294 aa18.11■□□□□ 0.49
VARS-218ENST00000459667 MOSPD2Q8NHP6 518 aa18.11■□□□□ 0.49
VARS-218ENST00000459667 SMAP2Q8WU79 429 aaPredicted RBP18.11■□□□□ 0.49
VARS-218ENST00000459667 IGFBPL1Q8WX77 278 aa18.11■□□□□ 0.49
VARS-218ENST00000459667 POP5Q969H6 163 aaKnown RBP18.11■□□□□ 0.49
VARS-218ENST00000459667 TMEM54Q969K7 222 aa18.11■□□□□ 0.49
VARS-218ENST00000459667 ZNF566Q969W8 418 aa18.11■□□□□ 0.49
VARS-218ENST00000459667 SLC25A44Q96H78 314 aaPredicted RBP18.11■□□□□ 0.49
VARS-218ENST00000459667 C7orf34Q96L11 122 aa18.11■□□□□ 0.49
VARS-218ENST00000459667 NMNAT1Q9HAN9 279 aaPredicted RBP18.11■□□□□ 0.49
VARS-218ENST00000459667 CISD1Q9NZ45 108 aaKnown RBP18.11■□□□□ 0.49
VARS-218ENST00000459667 GLTPQ9NZD2 209 aa18.11■□□□□ 0.49
VARS-218ENST00000459667 ACTR3BQ9P1U1 418 aa18.11■□□□□ 0.49
VARS-218ENST00000459667 LAMP3Q9UQV4 416 aa18.11■□□□□ 0.49
VARS-218ENST00000459667 POFUT2Q9Y2G5 429 aa18.11■□□□□ 0.49
VARS-218ENST00000459667 HIF3AQ9Y2N7 669 aa18.11■□□□□ 0.49
VARS-218ENST00000459667 F8P00451 2351 aa18.1■□□□□ 0.49
VARS-218ENST00000459667 H1F0P07305 194 aaKnown RBP18.1■□□□□ 0.49
VARS-218ENST00000459667 TSPAN19P0C672 248 aa18.1■□□□□ 0.49
VARS-218ENST00000459667 MAKP20794 623 aa18.1■□□□□ 0.49
VARS-218ENST00000459667 NKX6-1P78426 367 aaPredicted RBP18.1■□□□□ 0.49
VARS-218ENST00000459667 MBOAT2Q6ZWT7 520 aa18.1■□□□□ 0.49
VARS-218ENST00000459667 RRM2BQ7LG56 351 aa18.1■□□□□ 0.49
VARS-218ENST00000459667 DHFR2Q86XF0 187 aa18.1■□□□□ 0.49
VARS-218ENST00000459667 MEX3DQ86XN8 651 aaKnown RBP18.1■□□□□ 0.49
VARS-218ENST00000459667 LRRC75A-AS1Q8N1F1 130 aa18.1■□□□□ 0.49
VARS-218ENST00000459667 SLC38A2Q96QD8 506 aa18.1■□□□□ 0.49
VARS-218ENST00000459667 THTPAQ9BU02 230 aa18.1■□□□□ 0.49
VARS-218ENST00000459667 CXorf56Q9H5V9 222 aa18.1■□□□□ 0.49
VARS-218ENST00000459667 MOV10Q9HCE1 1003 aaKnown RBP18.1■□□□□ 0.49
VARS-218ENST00000459667 CELSR1Q9NYQ6 3014 aa18.09■□□□□ 0.49
VARS-218ENST00000459667 IGHV1-18A0A0C4DH31 117 aa18.09■□□□□ 0.49
VARS-218ENST00000459667 EFCAB9A8MZ26 197 aa18.09■□□□□ 0.49
VARS-218ENST00000459667 TMCC2O75069 709 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms