RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 ZNF337Q9Y3M9 751 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 AUP1Q9Y679 476 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 ADGRG4Q8IZF6 3080 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 INTS1Q8N201 2190 aaKnown RBP8.87□□□□□ -0.99
CCDC171-203ENST00000449575 TRGV5A0A0B4J1U4 118 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 OR2M5A3KFT3 312 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 SLC35F4A4IF30 521 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 EIF4E2O60573 245 aaKnown RBP8.87□□□□□ -0.99
CCDC171-203ENST00000449575 BMP7P18075 431 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 FPR1P21462 350 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 CFL1P23528 166 aaKnown RBP8.87□□□□□ -0.99
CCDC171-203ENST00000449575 DNAJA1P31689 397 aaKnown RBP8.87□□□□□ -0.99
CCDC171-203ENST00000449575 OR1E2P47887 323 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 KCNJ5P48544 419 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 RGS6P49758 472 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 GFRA1P56159 465 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 TEKQ02763 1124 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 EMC4Q5J8M3 183 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 RAET1LQ5VY80 246 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 POMZP3Q6PJE2 187 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 GFRALQ6UXV0 394 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 ZNF367Q7RTV3 350 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 KIF18BQ86Y91 864 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 CCDC120Q96HB5 630 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 HYLS1Q96M11 299 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 Q96MT0 163 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 CHCHD6Q9BRQ6 235 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 EXO5Q9H790 373 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 TMEM185BQ9H7F4 350 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 PTGES2Q9H7Z7 377 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 CTPS2Q9NRF8 586 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 PSORS1C1Q9UIG5 152 aa8.87□□□□□ -0.99
CCDC171-203ENST00000449575 SEMA7AO75326 666 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 NTN1O95631 604 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 BTF3P20290 206 aaKnown RBP8.86□□□□□ -0.99
CCDC171-203ENST00000449575 GNLYP22749 145 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 HTR2AP28223 471 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 SHC1P29353 583 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 PRKAR1BP31321 381 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 MAGEA2P43356 314 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 IDH2P48735 452 aaKnown RBP8.86□□□□□ -0.99
CCDC171-203ENST00000449575 ETV1P50549 477 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 DAPP51397 102 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 CLDN15P56746 228 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 RUNX1T1Q06455 604 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 SMN1Q16637 294 aaKnown RBP8.86□□□□□ -0.99
CCDC171-203ENST00000449575 TMEM44Q2T9K0 475 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 EIF2S3LQ2VIR3 472 aaKnown RBP8.86□□□□□ -0.99
CCDC171-203ENST00000449575 OR2T5Q6IEZ7 315 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 ZDHHC21Q8IVQ6 265 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 OR5M9Q8NGP3 310 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 OR2T29Q8NH02 315 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 VANGL1Q8TAA9 524 aaPredicted RBP8.86□□□□□ -0.99
CCDC171-203ENST00000449575 ENKURQ8TC29 256 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 TPD52L3Q96J77 140 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 TM9SF2Q99805 663 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 KCNS3Q9BQ31 491 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 OR51E2Q9H255 320 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 KRT84Q9NSB2 600 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 SH3BGRL2Q9UJC5 107 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 SAMD4AQ9UPU9 718 aaKnown RBP8.86□□□□□ -0.99
CCDC171-203ENST00000449575 U3KQV3 271 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 CLCA1A8K7I4 914 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 H3BML4 177 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 WBP4O75554 376 aaKnown RBP8.86□□□□□ -0.99
CCDC171-203ENST00000449575 LGI1O95970 557 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 SERPINA1P01009 418 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 ADORA3P0DMS8 318 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 PEPDP12955 493 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 IFI30P13284 250 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 EDN3P14138 238 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 PTNP21246 168 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 MSX1P28360 303 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 ZNF41P51814 821 aaPredicted RBP8.86□□□□□ -0.99
CCDC171-203ENST00000449575 CRYZQ08257 329 aaKnown RBP8.86□□□□□ -0.99
CCDC171-203ENST00000449575 MRPL28Q13084 256 aaKnown RBP8.86□□□□□ -0.99
CCDC171-203ENST00000449575 MAB21L1Q13394 359 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 CBFBQ13951 182 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 ELOAQ14241 798 aaKnown RBP8.86□□□□□ -0.99
CCDC171-203ENST00000449575 SLC35F1Q5T1Q4 408 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 CDH24Q86UP0 819 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 CMIPQ8IY22 773 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 GHDCQ8N2G8 530 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 RPRMLQ8N4K4 120 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 GDPD1Q8N9F7 314 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 OR6T1Q8NGN1 323 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 TIMP4Q99727 224 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 PINK1Q9BXM7 581 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 SRRQ9GZT4 340 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 MMP28Q9H239 520 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 TINAGQ9UJW2 476 aa8.86□□□□□ -0.99
CCDC171-203ENST00000449575 SPTBN1Q01082 2364 aaKnown RBP8.86□□□□□ -0.99
CCDC171-203ENST00000449575 A0A1B0GVC2 190 aa8.85□□□□□ -0.99
CCDC171-203ENST00000449575 A0A1W2PQ09 198 aa8.85□□□□□ -0.99
CCDC171-203ENST00000449575 ATP6V1G2-DDX39BF2Z307 99 aa8.85□□□□□ -0.99
CCDC171-203ENST00000449575 RGS5O15539 181 aa8.85□□□□□ -0.99
CCDC171-203ENST00000449575 SEC14L5O43304 696 aa8.85□□□□□ -0.99
CCDC171-203ENST00000449575 SUSD5O60279 629 aa8.85□□□□□ -0.99
CCDC171-203ENST00000449575 SUCLG1P53597 346 aaKnown RBP8.85□□□□□ -0.99
CCDC171-203ENST00000449575 CLDN20P56880 219 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms