RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 ZNF35P13682 527 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 EPHA3P29320 983 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 HPCAL1P37235 193 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 CAPZA2P47755 286 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 IDH3AP50213 366 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 ARF1P84077 181 aaKnown RBP10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 SKP2Q13309 424 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 GALNTL6Q49A17 601 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 DCST2Q5T1A1 773 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 NOXRED1Q6NXP6 359 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 USP51Q70EK9 711 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 LINGO2Q7L985 606 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 MDP1Q86V88 176 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 CCDC36Q8IYA8 594 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 PARP8Q8N3A8 854 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 ZNF563Q8TA94 476 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 C10orf82Q8WW14 230 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 PMM1Q92871 262 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 TMEM120AQ9BXJ8 343 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 PRDM13Q9H4Q3 707 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 MARCH7Q9H992 704 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 DECR2Q9NUI1 292 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 NKIRAS2Q9NYR9 191 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 COL7A1Q02388 2944 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 UBDO15205 165 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 TBX19O60806 448 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 CCDC22O60826 627 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 PEX11AO75192 247 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 UPK3AO75631 287 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 ZNF432O94892 652 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 CSTAP01040 98 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 IGHMP01871 453 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 UBTFL6P0CB48 400 aaPredicted RBP10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 IMPDH2P12268 514 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 PRPS1L1P21108 318 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 SELENOPP49908 381 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 SELENOVP59797 346 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 GALK2Q01415 458 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 ROR2Q01974 943 aaKnown RBP10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 COL10A1Q03692 680 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 LRRC74AQ0VAA2 488 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 DEFB112Q30KQ8 113 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 LSM12Q3MHD2 195 aaKnown RBP10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 PDCD4Q53EL6 469 aaKnown RBP10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 OXLD1Q5BKU9 147 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 PDZK1Q5T2W1 519 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 NXNQ6DKJ4 435 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 CGB2Q6NT52 195 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 ZNF620Q6ZNG0 422 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 GRINAQ7Z429 371 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 GPAT4Q86UL3 456 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 CIDECQ96AQ7 238 aaPredicted RBP10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 C3orf30Q96M34 536 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 PRPF18Q99633 342 aaKnown RBP10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 AIG1Q9NVV5 245 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 ZIM2Q9NZV7 527 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 TAAR3PQ9P1P4 343 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 POLR3KQ9Y2Y1 108 aaPredicted RBP10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 POLR3HQ9Y535 204 aaPredicted RBP10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 EPPK1P58107 5090 aaKnown RBP10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 DOCK11Q5JSL3 2073 aa10.64□□□□□ -0.71
AC004540.1-204ENST00000449537 ZNF503-AS2A6NEH8 195 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 PLATP00750 562 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 HMGN2P05204 90 aaKnown RBP10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 SDC1P18827 310 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 RPL15P61313 204 aaKnown RBP10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 PAX8Q06710 450 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 LASP1Q14847 261 aaKnown RBP10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 FXNQ16595 210 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 RFTN2Q52LD8 501 aaPredicted RBP10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 TMEM225Q6GV28 225 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 Q6YL49 198 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 TMEM86BQ8N661 226 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 TMEM99Q8N816 258 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 ADAMTS15Q8TE58 950 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 SNX33Q8WV41 574 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 CCL17Q92583 94 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 DDIT4LQ96D03 193 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 SLC47A1Q96FL8 570 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 MS4A3Q96HJ5 214 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 ZBTB18Q99592 522 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 LINC00470Q9BZP3 86 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 NMUR2Q9GZQ4 415 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 SERHL2Q9H4I8 314 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 WDR55Q9H6Y2 383 aaPredicted RBP10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 NOX4Q9NPH5 578 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 SDR39U1Q9NRG7 319 aaPredicted RBP10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 ATAD3AQ9NVI7 634 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 PCDHGB4Q9UN71 923 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 CACNG2Q9Y698 323 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 KCNE3Q9Y6H6 103 aa10.63□□□□□ -0.71
AC004540.1-204ENST00000449537 DSPPQ9NZW4 1301 aa10.62□□□□□ -0.71
AC004540.1-204ENST00000449537 TET2Q6N021 2002 aaPredicted RBP10.62□□□□□ -0.71
AC004540.1-204ENST00000449537 PPIAL4GP0DN37 164 aa10.62□□□□□ -0.71
AC004540.1-204ENST00000449537 RYKP34925 604 aa10.62□□□□□ -0.71
AC004540.1-204ENST00000449537 CLDN8P56748 225 aa10.62□□□□□ -0.71
AC004540.1-204ENST00000449537 MAPRE2Q15555 327 aa10.62□□□□□ -0.71
AC004540.1-204ENST00000449537 IL23RQ5VWK5 629 aa10.62□□□□□ -0.71
AC004540.1-204ENST00000449537 PRAMEF8Q5VWM4 474 aa10.62□□□□□ -0.71
AC004540.1-204ENST00000449537 PRAMEF7Q5VXH5 474 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms