RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 ZNF26P17031 533 aaPredicted RBP11.73□□□□□ -0.53
SNHG4-201ENST00000448190 OMPP47874 163 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 RASSF2P50749 326 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 ZNF83P51522 516 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 SMIM11AP58511 58 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 CTXN1P60606 82 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 TUBA1BP68363 451 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 TUBA4AP68366 448 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 MYBPC1Q00872 1141 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 TOP3AQ13472 1001 aaPredicted RBP11.73□□□□□ -0.53
SNHG4-201ENST00000448190 FLOT2Q14254 428 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 ACKR1Q16570 336 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 CEACAM16Q2WEN9 425 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 ALG10Q5BKT4 473 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 TMPRSS11FQ6ZWK6 438 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 TUBA1AQ71U36 451 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 PIWIL3Q7Z3Z3 882 aaKnown RBP11.73□□□□□ -0.53
SNHG4-201ENST00000448190 ZER1Q7Z7L7 766 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 ADGRG5Q8IZF4 528 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 BCL2L2Q92843 193 aaPredicted RBP11.73□□□□□ -0.53
SNHG4-201ENST00000448190 DHRS1Q96LJ7 313 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 CHID1Q9BWS9 393 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 LINC00470Q9BZP3 86 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 OR10A4Q9H209 315 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 ANKRD19PQ9H560 264 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 SLC7A8Q9UHI5 535 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 ZNF346Q9UL40 294 aaKnown RBP11.73□□□□□ -0.53
SNHG4-201ENST00000448190 TMCC3Q9ULS5 477 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 U3KQV3 271 aa11.73□□□□□ -0.53
SNHG4-201ENST00000448190 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.72□□□□□ -0.53
SNHG4-201ENST00000448190 DPRXA6NFQ7 191 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 OR6C65A6NJZ3 312 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 MCIDASD6RGH6 385 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 AKAP8O43823 692 aaKnown RBP11.72□□□□□ -0.53
SNHG4-201ENST00000448190 OR10H3O60404 316 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 PTP4A3O75365 173 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 LOXP28300 417 aaPredicted RBP11.72□□□□□ -0.53
SNHG4-201ENST00000448190 RPL4P36578 427 aaKnown RBP11.72□□□□□ -0.53
SNHG4-201ENST00000448190 CSNK1A1P48729 337 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 ERVK-25P63136 954 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 TGFBR3Q03167 851 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 ZBED5Q49AG3 693 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 TIMM23BQ5SRD1 257 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 OR7E24Q6IFN5 339 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 LRFN4Q6PJG9 635 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 CCDC121Q6ZUS5 278 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 ABHD12BQ7Z5M8 362 aaPredicted RBP11.72□□□□□ -0.53
SNHG4-201ENST00000448190 OR1K1Q8NGR3 316 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 OR6X1Q8NH79 312 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 HTRA1Q92743 480 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 SLC25A44Q96H78 314 aaPredicted RBP11.72□□□□□ -0.53
SNHG4-201ENST00000448190 TRIM15Q9C019 465 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 SLC17A5Q9NRA2 495 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 VNN3Q9NY84 501 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 NPAP1Q9NZP6 1156 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 POFUT2Q9Y2G5 429 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 HIF3AQ9Y2N7 669 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 SLC25A15Q9Y619 301 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 CSMD2Q7Z408 3487 aa11.72□□□□□ -0.53
SNHG4-201ENST00000448190 ANKHD1Q8IWZ3 2542 aaKnown RBP11.71□□□□□ -0.53
SNHG4-201ENST00000448190 POLQO75417 2590 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 DHRS12A0PJE2 317 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 HTR3EA5X5Y0 456 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 UNC119BA6NIH7 251 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 AQP12BA6NM10 295 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 M0R1B8 84 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 QDPRP09417 244 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 TSPAN19P0C672 248 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 RAP2AP10114 183 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 ACVR1BP36896 505 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 SLC9A3P48764 834 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 CLRN1P58418 232 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 TBRG1Q3YBR2 411 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 BEX5Q5H9J7 111 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 SEZ6L2Q6UXD5 910 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 AQP12AQ8IXF9 295 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 CLDN22Q8N7P3 220 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 LRRC75AQ8NAA5 344 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 ASB10Q8WXI3 467 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 NEUROG1Q92886 237 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 TMEM54Q969K7 222 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 ZNF566Q969W8 418 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 LRR1Q96L50 414 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 ADAD1Q96M93 576 aaKnown RBP11.71□□□□□ -0.53
SNHG4-201ENST00000448190 ULBP2Q9BZM5 246 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 MAGIXQ9H6Y5 334 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 B3GAT2Q9NPZ5 323 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 GLTPQ9NZD2 209 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 ITGB1BP2Q9UKP3 347 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 TMEM5Q9Y2B1 443 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 LYVE1Q9Y5Y7 322 aa11.71□□□□□ -0.53
SNHG4-201ENST00000448190 CSMD1Q96PZ7 3565 aa11.71□□□□□ -0.54
SNHG4-201ENST00000448190 RPL36A-HNRNPH2H7BZ11 118 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 TRMUO75648 421 aaKnown RBP11.7□□□□□ -0.54
SNHG4-201ENST00000448190 KRT36O76013 467 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 PGA4P0DJD7 388 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 PGA3P0DJD8 388 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 ACADSP16219 412 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 MAGEA2P43356 314 aa11.7□□□□□ -0.54
SNHG4-201ENST00000448190 CAPZA2P47755 286 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms