RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 GPR55Q9Y2T6 319 aaPredicted RBP6.75□□□□□ -1.33
SYNE1-213ENST00000448038 ANK1P16157 1881 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 ANKUB1A6NFN9 424 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 CBX7O95931 251 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 PPP5CP53041 499 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 AIMP2Q13155 320 aaKnown RBP6.75□□□□□ -1.33
SYNE1-213ENST00000448038 MFAP5Q13361 173 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 SLC25A25Q6KCM7 469 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 CNIH2Q6PI25 160 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 KCTD9Q7L273 389 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 DCXRQ7Z4W1 244 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 LACC1Q8IV20 430 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 CENPSQ8N2Z9 138 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 FAM26EQ8N5C1 309 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 ARIH2OSQ8N7S6 290 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 DNASE2BQ8WZ79 361 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 RPL3LQ92901 407 aaKnown RBP6.75□□□□□ -1.33
SYNE1-213ENST00000448038 ANKRD9Q96BM1 317 aaPredicted RBP6.75□□□□□ -1.33
SYNE1-213ENST00000448038 ZG16BQ96DA0 208 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 VWCEQ96DN2 955 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 SLC6A7Q99884 636 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 PLA2G3Q9NZ20 509 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 CLEC2DQ9UHP7 191 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 RASD1Q9Y272 281 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 ARRDC5A6NEK1 342 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 OR6C70A6NIJ9 312 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 DOK2O60496 412 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 SCGNO76038 276 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 HRGP04196 525 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 SCG5P05408 212 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 CD83Q01151 205 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 IL10RAQ13651 578 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 ARL6IP1Q15041 203 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 SLC22A6Q4U2R8 563 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 C16orf47Q6ZP98 133 aaPredicted RBP6.75□□□□□ -1.33
SYNE1-213ENST00000448038 MOB3CQ70IA8 216 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 SLC16A9Q7RTY1 509 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 ITFG2Q969R8 447 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 ZBTB8AQ96BR9 441 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 SARAFQ96BY9 339 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 NAA50Q9GZZ1 169 aaKnown RBP6.75□□□□□ -1.33
SYNE1-213ENST00000448038 FBXO34Q9NWN3 711 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 A4GNTQ9UNA3 340 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 B3GNT3Q9Y2A9 372 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 EP400Q96L91 3159 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 C13orf42A0A1B0GVH6 325 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 SPAARA0A1B0GVQ0 90 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 ISPDA4D126 451 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 ABHD16AO95870 558 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 FCGR2AP12318 317 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 BMP4P12644 408 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 PRSS3P35030 304 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 RPS25P62851 125 aaKnown RBP6.75□□□□□ -1.33
SYNE1-213ENST00000448038 OR1C1Q15619 314 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 ADPRMQ3LIE5 342 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 RNASE10Q5GAN6 216 aaKnown RBP6.75□□□□□ -1.33
SYNE1-213ENST00000448038 EMC4Q5J8M3 183 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.75□□□□□ -1.33
SYNE1-213ENST00000448038 PYHIN1Q6K0P9 492 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 ESPNLQ6ZVH7 1005 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 SERPINA12Q8IW75 414 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 SLC25A45Q8N413 288 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 GJC3Q8NFK1 279 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 CT55Q8WUE5 264 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 FOXRED1Q96CU9 486 aaPredicted RBP6.75□□□□□ -1.33
SYNE1-213ENST00000448038 ZNF764Q96H86 408 aaPredicted RBP6.75□□□□□ -1.33
SYNE1-213ENST00000448038 PAPOLGQ9BWT3 736 aaKnown RBP6.75□□□□□ -1.33
SYNE1-213ENST00000448038 NIPAL2Q9H841 368 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 NGBQ9NPG2 151 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 ZNF223Q9UK11 482 aaPredicted RBP6.75□□□□□ -1.33
SYNE1-213ENST00000448038 PILRBQ9UKJ0 227 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 B3GALT5Q9Y2C3 310 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 A0A1W2PS29 197 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 ZC3H12DA2A288 527 aaKnown RBP6.75□□□□□ -1.33
SYNE1-213ENST00000448038 SBK2P0C263 348 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 PNLIPP16233 465 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 STOMP27105 288 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 OPRL1P41146 370 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 EMP3P54852 163 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 ACTBP60709 375 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 ACTG1P63261 375 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 ACER2Q5QJU3 275 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 FAHD1Q6P587 224 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 GLB1L2Q8IW92 636 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 FOXRED2Q8IWF2 684 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 LOXL4Q96JB6 756 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 CCDC32Q9BV29 185 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 SLC5A7Q9GZV3 580 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 OBP2BQ9NPH6 170 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 KCNS2Q9ULS6 477 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 PMF1-BGLAPU3KQ54 211 aa6.75□□□□□ -1.33
SYNE1-213ENST00000448038 NPIPB8E9PQR5 432 aa6.74□□□□□ -1.33
SYNE1-213ENST00000448038 L7N2F9 121 aa6.74□□□□□ -1.33
SYNE1-213ENST00000448038 PRRG2O14669 202 aa6.74□□□□□ -1.33
SYNE1-213ENST00000448038 IL1AP01583 271 aa6.74□□□□□ -1.33
SYNE1-213ENST00000448038 QDPRP09417 244 aa6.74□□□□□ -1.33
SYNE1-213ENST00000448038 SP9P0CG40 484 aa6.74□□□□□ -1.33
SYNE1-213ENST00000448038 SDHBP21912 280 aa6.74□□□□□ -1.33
SYNE1-213ENST00000448038 TNFSF4P23510 183 aa6.74□□□□□ -1.33
SYNE1-213ENST00000448038 DSCR4P56555 118 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms