RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 RPS4Y2Q8TD47 263 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 HSD17B8Q92506 261 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 MRPL48Q96GC5 212 aaKnown RBP15.72■□□□□ 0.11
SMC6-206ENST00000446852 MED12Q93074 2177 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 A0A087WV48 116 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 A0A0G2JK05 382 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 A0A1W2PPK0 400 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 PMS2P1A4D2B8 440 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 B4E171 279 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 FLRT2O43155 660 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 SSX4O60224 188 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 IGHMP01871 453 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 OR8G3PP0DMU2 310 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 IL7P13232 177 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 TSPAN7P41732 249 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 MELKQ14680 651 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 OR7A5Q15622 319 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 IDNKQ5T6J7 187 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 OTPQ5XKR4 325 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 HBMQ6B0K9 141 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 CNIH2Q6PI25 160 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 XKRXQ6PP77 449 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 OR6N2Q8NGY6 317 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 PPP1R14BQ96C90 147 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 CMKLR1Q99788 373 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 CPNE5Q9HCH3 593 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 MRM2Q9UI43 246 aaKnown RBP15.72■□□□□ 0.11
SMC6-206ENST00000446852 PCDHGB2Q9Y5G2 931 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 CHCHD2Q9Y6H1 151 aaPredicted RBP15.72■□□□□ 0.11
SMC6-206ENST00000446852 MS4A18H0YCH9 400 aa15.71■□□□□ 0.11
SMC6-206ENST00000446852 DLGAP3O95886 979 aa15.71■□□□□ 0.11
SMC6-206ENST00000446852 CD1AP06126 327 aa15.71■□□□□ 0.11
SMC6-206ENST00000446852 HNRNPCP07910 306 aaKnown RBP eCLIP15.71■□□□□ 0.11
SMC6-206ENST00000446852 MYL9P24844 172 aa15.71■□□□□ 0.11
SMC6-206ENST00000446852 MSX1P28360 303 aa15.71■□□□□ 0.11
SMC6-206ENST00000446852 THBS2P35442 1172 aa15.71■□□□□ 0.11
SMC6-206ENST00000446852 ZNF41P51814 821 aaPredicted RBP15.71■□□□□ 0.11
SMC6-206ENST00000446852 MS4A18Q3C1V0 323 aa15.71■□□□□ 0.11
SMC6-206ENST00000446852 AGAP7PQ5VUJ5 663 aa15.71■□□□□ 0.11
SMC6-206ENST00000446852 GDPD3Q7L5L3 318 aa15.71■□□□□ 0.11
SMC6-206ENST00000446852 DPY19L4Q7Z388 723 aa15.71■□□□□ 0.11
SMC6-206ENST00000446852 CADM3Q8N126 398 aa15.71■□□□□ 0.11
SMC6-206ENST00000446852 TEX19Q8NA77 164 aa15.71■□□□□ 0.11
SMC6-206ENST00000446852 OR6S1Q8NH40 331 aa15.71■□□□□ 0.11
SMC6-206ENST00000446852 POC1BQ8TC44 478 aa15.71■□□□□ 0.11
SMC6-206ENST00000446852 ADAD1Q96M93 576 aaKnown RBP15.71■□□□□ 0.11
SMC6-206ENST00000446852 FOXN4Q96NZ1 517 aa15.71■□□□□ 0.11
SMC6-206ENST00000446852 OR14A2Q96R54 314 aa15.71■□□□□ 0.11
SMC6-206ENST00000446852 NEURL2Q9BR09 285 aa15.71■□□□□ 0.11
SMC6-206ENST00000446852 FBXL2Q9UKC9 423 aa15.71■□□□□ 0.11
SMC6-206ENST00000446852 H3BML4 177 aa15.71■□□□□ 0.1
SMC6-206ENST00000446852 ZNF208O43345 1280 aa15.71■□□□□ 0.1
SMC6-206ENST00000446852 ABHD16AO95870 558 aa15.71■□□□□ 0.1
SMC6-206ENST00000446852 IMPDH2P12268 514 aa15.71■□□□□ 0.1
SMC6-206ENST00000446852 TCEA1P23193 301 aaKnown RBP15.71■□□□□ 0.1
SMC6-206ENST00000446852 DEFA1P59665 94 aa15.71■□□□□ 0.1
SMC6-206ENST00000446852 DEFA3P59666 94 aa15.71■□□□□ 0.1
SMC6-206ENST00000446852 FOXK1P85037 733 aa15.71■□□□□ 0.1
SMC6-206ENST00000446852 PUDPQ08623 228 aa15.71■□□□□ 0.1
SMC6-206ENST00000446852 CCDC157Q569K6 752 aa15.71■□□□□ 0.1
SMC6-206ENST00000446852 SLC25A53Q5H9E4 307 aa15.71■□□□□ 0.1
SMC6-206ENST00000446852 TPRA1Q86W33 373 aa15.71■□□□□ 0.1
SMC6-206ENST00000446852 OR11G2Q8NGC1 345 aa15.71■□□□□ 0.1
SMC6-206ENST00000446852 MFSD8Q8NHS3 518 aa15.71■□□□□ 0.1
SMC6-206ENST00000446852 NXPE2Q96DL1 559 aa15.71■□□□□ 0.1
SMC6-206ENST00000446852 SMAD5Q99717 465 aaKnown RBP15.71■□□□□ 0.1
SMC6-206ENST00000446852 VSX1Q9NZR4 365 aaPredicted RBP15.71■□□□□ 0.1
SMC6-206ENST00000446852 ING1Q9UK53 422 aaPredicted RBP15.71■□□□□ 0.1
SMC6-206ENST00000446852 B9D1Q9UPM9 204 aa15.71■□□□□ 0.1
SMC6-206ENST00000446852 A0A1W2PQ09 198 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 TMCC2O75069 709 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 UPK3AO75631 287 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 SERPINA3P01011 423 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 RANBP1P43487 201 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 CLDN6P56747 220 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 SFXN4Q6P4A7 337 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 WDFY1Q8IWB7 410 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 OR2M3Q8NG83 312 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 MRGPRX4Q96LA9 322 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 SNX18Q96RF0 628 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 INTS14Q96SY0 518 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 SOSTQ9BQB4 213 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 TSPAN10Q9H1Z9 355 aaPredicted RBP15.7■□□□□ 0.1
SMC6-206ENST00000446852 SDHAF3Q9NRP4 125 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 MALT1Q9UDY8 824 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 LAMP5Q9UJQ1 280 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 FKBP7Q9Y680 259 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 IGLV1-36A0A0B4J1U3 117 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 BOLA2-SMG1P6H3BVE0 249 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 MASP2O00187 686 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 TRIM3O75382 744 aaPredicted RBP15.7■□□□□ 0.1
SMC6-206ENST00000446852 RPP14O95059 124 aaKnown RBP15.7■□□□□ 0.1
SMC6-206ENST00000446852 CTLA4P16410 223 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 ALOX5APP20292 161 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 EVX1P49640 407 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 C19orf57Q0VDD7 668 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 EXT1Q16394 746 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 SLC25A35Q3KQZ1 300 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 PLA2G2CQ5R387 149 aa15.7■□□□□ 0.1
SMC6-206ENST00000446852 PRAMEF20Q5VT98 475 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms