RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 ZNF239Q16600 458 aaKnown RBP7.28□□□□□ -1.24
SMG1-202ENST00000446231 ZNF440Q8IYI8 595 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 SMIM19Q96E16 107 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 FBXO17Q96EF6 278 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 P2RY12Q9H244 342 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 RBPJLQ9UBG7 517 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 KLF8O95600 359 aaPredicted RBP7.28□□□□□ -1.24
SMG1-202ENST00000446231 Q499Y3 187 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 GAB2Q9UQC2 676 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 ZC3H12DA2A288 527 aaKnown RBP7.28□□□□□ -1.24
SMG1-202ENST00000446231 GDI1P31150 447 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 F2RL1P55085 397 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 ASPGQ86U10 573 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 OR6N1Q8NGY5 312 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 PHYHIPLQ96FC7 376 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 TESQ9UGI8 421 aaKnown RBP7.28□□□□□ -1.24
SMG1-202ENST00000446231 CSTAP01040 98 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 F3P13726 295 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 TMEM201Q5SNT2 666 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 CD300LDQ6UXZ3 194 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 TMEM127O75204 238 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 NSA2O95478 260 aaKnown RBP7.28□□□□□ -1.24
SMG1-202ENST00000446231 HEXBP07686 556 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 HOXA9P31269 272 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 LMAN2Q12907 356 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 LAIR2Q6ISS4 152 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 RHOUQ7L0Q8 258 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 BAGE3Q86Y29 109 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 BAGE2Q86Y30 109 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 OR52B4Q8NGK2 314 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 OR5M9Q8NGP3 310 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 SLC35B3Q9H1N7 401 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 ISG20L2Q9H9L3 353 aaKnown RBP7.28□□□□□ -1.24
SMG1-202ENST00000446231 ATXN7L1Q9ULK2 861 aaPredicted RBP7.28□□□□□ -1.24
SMG1-202ENST00000446231 FOLR1P15328 257 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 ABI3BPQ7Z7G0 1075 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 SENP5Q96HI0 755 aaPredicted RBP7.28□□□□□ -1.24
SMG1-202ENST00000446231 RGRP47804 291 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 SLC14A1Q13336 389 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 IAH1Q2TAA2 248 aaPredicted RBP7.28□□□□□ -1.24
SMG1-202ENST00000446231 TMEM41BQ5BJD5 291 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 ADARB2Q9NS39 739 aaKnown RBP7.28□□□□□ -1.24
SMG1-202ENST00000446231 GPR160Q9UJ42 338 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 FAM71E1Q6IPT2 247 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 RNF170Q96K19 258 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 FZD3Q9NPG1 666 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 WASF3Q9UPY6 502 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 CHD1O14646 1710 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 NFKBIEO00221 500 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 GPR137BO60478 399 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 ZNF620Q6ZNG0 422 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 HSD11B1LQ7Z5J1 315 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 TOE1Q96GM8 510 aaKnown RBP7.28□□□□□ -1.24
SMG1-202ENST00000446231 DKKL1Q9UK85 242 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 MRPS23Q9Y3D9 190 aaKnown RBP7.28□□□□□ -1.24
SMG1-202ENST00000446231 IMPA1P29218 277 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 LINC00303Q3SY05 128 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 FJX1Q86VR8 437 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 ISG20Q96AZ6 181 aaKnown RBP7.28□□□□□ -1.24
SMG1-202ENST00000446231 VPS25Q9BRG1 176 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 SHC2P98077 582 aa7.27□□□□□ -1.24
SMG1-202ENST00000446231 FAM27D1Q5T7N8 215 aa7.27□□□□□ -1.24
SMG1-202ENST00000446231 FAAP20Q6NZ36 180 aa7.27□□□□□ -1.24
SMG1-202ENST00000446231 SOCS4Q8WXH5 440 aa7.27□□□□□ -1.24
SMG1-202ENST00000446231 MVB12BQ9H7P6 319 aa7.27□□□□□ -1.24
SMG1-202ENST00000446231 PRODH2Q9UF12 536 aa7.27□□□□□ -1.24
SMG1-202ENST00000446231 DPP7Q9UHL4 492 aa7.27□□□□□ -1.24
SMG1-202ENST00000446231 B3GALT5Q9Y2C3 310 aa7.27□□□□□ -1.24
SMG1-202ENST00000446231 OR1A2Q9Y585 309 aa7.27□□□□□ -1.24
SMG1-202ENST00000446231 SYT7O43581 403 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 GYPBP06028 91 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 SERPINA2P20848 420 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 PTGER1P34995 402 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 DTD1Q8TEA8 209 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 RNF128Q8TEB7 428 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 PLXNB1O43157 2135 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 HMGN2P05204 90 aaKnown RBP7.27□□□□□ -1.25
SMG1-202ENST00000446231 DIO1P49895 249 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 MFGE8Q08431 387 aaPredicted RBP7.27□□□□□ -1.25
SMG1-202ENST00000446231 KCNIP4Q6PIL6 250 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 NUDCD2Q8WVJ2 157 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 NME2P1O60361 137 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 GLSO94925 669 aaPredicted RBP7.27□□□□□ -1.25
SMG1-202ENST00000446231 ZNF136P52737 540 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 TNFRSF13CQ96RJ3 184 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 MRPL22Q9NWU5 206 aaKnown RBP7.27□□□□□ -1.25
SMG1-202ENST00000446231 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.27□□□□□ -1.25
SMG1-202ENST00000446231 NPIPB15A6NHN6 443 aaPredicted RBP7.27□□□□□ -1.25
SMG1-202ENST00000446231 EOMESO95936 686 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 FGF7P21781 194 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 NFYBP25208 207 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 SULF2Q8IWU5 870 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 CPXM2Q8N436 756 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 OR1F2PQ96R84 312 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 ZNF426Q9BUY5 554 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 FXYD4P59646 89 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 ELOCQ15369 112 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 DCST2Q5T1A1 773 aa7.27□□□□□ -1.25
SMG1-202ENST00000446231 ZNF574Q6ZN55 896 aaPredicted RBP7.27□□□□□ -1.25
SMG1-202ENST00000446231 ZNF275Q9NSD4 429 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms