RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 BLOC1S5-TXNDC5H3BN57 136 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 RPL36A-HNRNPH2H7BZ11 118 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 J3QW42 95 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 WWP2O00308 870 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 GABRPO00591 440 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 KPNA4O00629 521 aaPredicted RBP2.54□□□□□ -2
LINC00393-201ENST00000443621 PDCD5O14737 125 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 RNF13O43567 381 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 SULT1B1O43704 296 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 PRKNO60260 465 aaPredicted RBP2.54□□□□□ -2
LINC00393-201ENST00000443621 PIP5K1CO60331 668 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 ZIC3O60481 467 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 RAD1O60671 282 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 SLC19A2O60779 497 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 KHDRBS3O75525 346 aaKnown RBP2.54□□□□□ -2
LINC00393-201ENST00000443621 CEACAM4O75871 244 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 RGS9O75916 674 aaPredicted RBP2.54□□□□□ -2
LINC00393-201ENST00000443621 SNAPC5O75971 98 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 SCGNO76038 276 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 PPP1R3DO95685 299 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 PTTG1O95997 202 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 IGHG1P01857 330 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 HLA-DQB1P01920 261 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 KRT8P05787 483 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 IGFBP1P08833 259 aaPredicted RBP2.54□□□□□ -2
LINC00393-201ENST00000443621 UCHL1P09936 223 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 NPIPA8P0DM63 369 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 CALCBP10092 127 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 LIPCP11150 499 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 HOXB1P14653 301 aaPredicted RBP2.54□□□□□ -2
LINC00393-201ENST00000443621 LIFP15018 202 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 CPN1P15169 458 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 ZNF28P17035 718 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 ZNF43P17038 809 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 CELP19835 753 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 NPR2P20594 1047 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 TUBG1P23258 451 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 DPP4P27487 766 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 RBMS1P29558 406 aaKnown RBP2.54□□□□□ -2
LINC00393-201ENST00000443621 GRPRP30550 384 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 SDC2P34741 201 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 PTGER1P34995 402 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 AQP2P41181 271 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 MNDAP41218 407 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 SOX3P41225 446 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 CDKN2AP42771 156 aaKnown RBP2.54□□□□□ -2
LINC00393-201ENST00000443621 GUCA1AP43080 201 aaPredicted RBP2.54□□□□□ -2
LINC00393-201ENST00000443621 MAP2K4P45985 399 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 RFX3P48380 749 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 ENTPD1P49961 510 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 P2RY4P51582 365 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 CCR4P51679 360 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 BMXP51813 675 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 GFRA1P56159 465 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 FBXW4P57775 412 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 DEFA1P59665 94 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 DEFA3P59666 94 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 PPP3R1P63098 170 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 MRPS10P82664 201 aaKnown RBP2.54□□□□□ -2
LINC00393-201ENST00000443621 LSM11P83369 360 aaKnown RBP eCLIP2.54□□□□□ -21e-7■■■□□ 15.3
LINC00393-201ENST00000443621 HOXC5Q00444 222 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 HSF1Q00613 529 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 TLE3Q04726 772 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 SSBP1Q04837 148 aaKnown RBP2.54□□□□□ -2
LINC00393-201ENST00000443621 LTBQ06643 244 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 CDC20Q12834 499 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 ECH1Q13011 328 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 MYBPHQ13203 477 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 SPCS2Q15005 226 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 CDK5R1Q15078 307 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 INAQ16352 499 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 SSX1Q16384 188 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 ACKR1Q16570 336 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 TUSC1Q2TAM9 212 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 EIF2S3LQ2VIR3 472 aaKnown RBP2.54□□□□□ -2
LINC00393-201ENST00000443621 MS4A18Q3C1V0 323 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 TBC1D25Q3MII6 688 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 MESTQ5EB52 335 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 CLEC12AQ5QGZ9 265 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 DCAF10Q5QP82 559 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 DDI2Q5TDH0 399 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 STPG1Q5TH74 334 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 ABHD17BQ5VST6 288 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 FAM69BQ5VUD6 431 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 TMEM244Q5VVB8 128 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 HBMQ6B0K9 141 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 SLC18B1Q6NT16 456 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 RPUSD3Q6P087 351 aaKnown RBP2.54□□□□□ -2
LINC00393-201ENST00000443621 LEG1Q6P5S2 330 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 XKRXQ6PP77 449 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 LRRN1Q6UXK5 716 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 ZNF704Q6ZNC4 412 aaPredicted RBP2.54□□□□□ -2
LINC00393-201ENST00000443621 KRT74Q7RTS7 529 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 SSX8Q7RTT4 187 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 OLIG3Q7RTU3 272 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 TIPARPQ7Z3E1 657 aaKnown RBP2.54□□□□□ -2
LINC00393-201ENST00000443621 FAM220AQ7Z4H9 259 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 CCDC190Q86UF4 302 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 LHFPL3Q86UP9 236 aa2.54□□□□□ -2
LINC00393-201ENST00000443621 LRRC28Q86X40 367 aaPredicted RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms