RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 ACTR3P61158 418 aa14.1□□□□□ -0.15
USP39-205ENST00000442708 MICAQ29983 383 aa14.1□□□□□ -0.15
USP39-205ENST00000442708 ARMC4Q5T2S8 1044 aa14.1□□□□□ -0.15
USP39-205ENST00000442708 BHLHA15Q7RTS1 189 aaPredicted RBP14.1□□□□□ -0.15
USP39-205ENST00000442708 HS3ST5Q8IZT8 346 aa14.1□□□□□ -0.15
USP39-205ENST00000442708 POMGNT2Q8NAT1 580 aa14.1□□□□□ -0.15
USP39-205ENST00000442708 OR6X1Q8NH79 312 aa14.1□□□□□ -0.15
USP39-205ENST00000442708 GNPDA2Q8TDQ7 276 aa14.1□□□□□ -0.15
USP39-205ENST00000442708 ASB10Q8WXI3 467 aa14.1□□□□□ -0.15
USP39-205ENST00000442708 KISS1RQ969F8 398 aaPredicted RBP14.1□□□□□ -0.15
USP39-205ENST00000442708 S100PBPQ96BU1 408 aa14.1□□□□□ -0.15
USP39-205ENST00000442708 ACTR6Q9GZN1 396 aa14.1□□□□□ -0.15
USP39-205ENST00000442708 GPR35Q9HC97 309 aa14.1□□□□□ -0.15
USP39-205ENST00000442708 ARMC1Q9NVT9 282 aa14.1□□□□□ -0.15
USP39-205ENST00000442708 TEX15Q9BXT5 2789 aa14.1□□□□□ -0.15
USP39-205ENST00000442708 A0A1W2PRG6 482 aa14.09□□□□□ -0.15
USP39-205ENST00000442708 M0R3G1 203 aa14.09□□□□□ -0.15
USP39-205ENST00000442708 BCL10O95999 233 aa14.09□□□□□ -0.15
USP39-205ENST00000442708 IGHMP01871 453 aa14.09□□□□□ -0.15
USP39-205ENST00000442708 PRF1P14222 555 aa14.09□□□□□ -0.15
USP39-205ENST00000442708 HOXB6P17509 224 aaKnown RBP14.09□□□□□ -0.15
USP39-205ENST00000442708 ERVK-25P63136 954 aa14.09□□□□□ -0.15
USP39-205ENST00000442708 ROR2Q01974 943 aaKnown RBP14.09□□□□□ -0.15
USP39-205ENST00000442708 TOP3AQ13472 1001 aaPredicted RBP14.09□□□□□ -0.15
USP39-205ENST00000442708 GABRA6Q16445 453 aa14.09□□□□□ -0.15
USP39-205ENST00000442708 ZSCAN26Q16670 478 aa14.09□□□□□ -0.15
USP39-205ENST00000442708 ANKDD1AQ495B1 522 aa14.09□□□□□ -0.15
USP39-205ENST00000442708 AQP11Q8NBQ7 271 aa14.09□□□□□ -0.15
USP39-205ENST00000442708 TMEM54Q969K7 222 aa14.09□□□□□ -0.15
USP39-205ENST00000442708 MARVELD3Q96A59 401 aa14.09□□□□□ -0.15
USP39-205ENST00000442708 TSPAN32Q96QS1 320 aa14.09□□□□□ -0.15
USP39-205ENST00000442708 KATNB1Q9BVA0 655 aa14.09□□□□□ -0.15
USP39-205ENST00000442708 TXNIPQ9H3M7 391 aa14.09□□□□□ -0.15
USP39-205ENST00000442708 DENND2DQ9H6A0 471 aaPredicted RBP14.09□□□□□ -0.15
USP39-205ENST00000442708 KRCC1Q9NPI7 259 aaPredicted RBP14.09□□□□□ -0.15
USP39-205ENST00000442708 TAS2R16Q9NYV7 291 aa14.09□□□□□ -0.15
USP39-205ENST00000442708 DNAJB9Q9UBS3 223 aa14.09□□□□□ -0.15
USP39-205ENST00000442708 ZNF346Q9UL40 294 aaKnown RBP14.09□□□□□ -0.15
USP39-205ENST00000442708 ADAM18Q9Y3Q7 739 aa14.09□□□□□ -0.15
USP39-205ENST00000442708 AP4S1Q9Y587 144 aa14.09□□□□□ -0.15
USP39-205ENST00000442708 MAGED1Q9Y5V3 778 aaPredicted RBP14.09□□□□□ -0.15
USP39-205ENST00000442708 NPIPB13A6NJU9 1138 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 OR6C65A6NJZ3 312 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 ZNF726A6NNF4 738 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 NPIPB4C9JG80 1138 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 ANKRD65E5RJM6 399 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 RPL36A-HNRNPH2H7BZ11 118 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 GNGT2O14610 69 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 AKAP8O43823 692 aaKnown RBP14.08□□□□□ -0.16
USP39-205ENST00000442708 TRMUO75648 421 aaKnown RBP14.08□□□□□ -0.16
USP39-205ENST00000442708 RAD51DO75771 328 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 KRT33AO76009 404 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 PGA4P0DJD7 388 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 PGA3P0DJD8 388 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 EPXP11678 715 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 CDH2P19022 906 aaPredicted RBP14.08□□□□□ -0.16
USP39-205ENST00000442708 PRKACGP22612 351 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 IL32P24001 234 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 MPGP29372 298 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 PRPS1P60891 318 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 RPL27P61353 136 aaKnown RBP14.08□□□□□ -0.16
USP39-205ENST00000442708 TSPAN31Q12999 210 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 HMBOX1Q6NT76 420 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 LRFN4Q6PJG9 635 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 SEZ6L2Q6UXD5 910 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 FAM122BQ7Z309 247 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 STEAP2Q8NFT2 490 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 ZNF519Q8TB69 540 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 FAM222BQ8WU58 562 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 PYDC1Q8WXC3 89 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 HDAC2Q92769 488 aaKnown RBP14.08□□□□□ -0.16
USP39-205ENST00000442708 GTPBP3Q969Y2 492 aaKnown RBP14.08□□□□□ -0.16
USP39-205ENST00000442708 SLC25A44Q96H78 314 aaPredicted RBP14.08□□□□□ -0.16
USP39-205ENST00000442708 ZC3HAV1LQ96H79 300 aaKnown RBP14.08□□□□□ -0.16
USP39-205ENST00000442708 LRR1Q96L50 414 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 ADAD1Q96M93 576 aaKnown RBP14.08□□□□□ -0.16
USP39-205ENST00000442708 MED18Q9BUE0 208 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 HDHD5Q9BXW7 423 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 MRPL13Q9BYD1 178 aaKnown RBP14.08□□□□□ -0.16
USP39-205ENST00000442708 OR10A4Q9H209 315 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 YY1AP1Q9H869 796 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 CRLF2Q9HC73 371 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 KCNN3Q9UGI6 736 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 TACC2O95359 2948 aa14.08□□□□□ -0.16
USP39-205ENST00000442708 ZNF587BE7ETH6 402 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 H3BNX3 289 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 SIAH2O43255 324 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 HNRNPRO43390 633 aaKnown RBP14.07□□□□□ -0.16
USP39-205ENST00000442708 NDUFB2O95178 105 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 TP53P04637 393 aaPredicted RBP14.07□□□□□ -0.16
USP39-205ENST00000442708 IGFBP1P08833 259 aaPredicted RBP14.07□□□□□ -0.16
USP39-205ENST00000442708 ACADSP16219 412 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 RPL4P36578 427 aaKnown RBP14.07□□□□□ -0.16
USP39-205ENST00000442708 IFNGR2P38484 337 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 PEX19P40855 299 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 MYBPC1Q00872 1141 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 ATP6AP1Q15904 470 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 HIST3H3Q16695 136 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 CEACAM16Q2WEN9 425 aa14.07□□□□□ -0.16
USP39-205ENST00000442708 SMARCD3Q6STE5 483 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms