RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 SPIBQ01892 262 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 ROR2Q01974 943 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 CHRNB3Q05901 458 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 LGALS3BPQ08380 585 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 FAM98BQ52LJ0 330 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 ALG10Q5BKT4 473 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 SEZ6L2Q6UXD5 910 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 LINGO2Q7L985 606 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 OAFQ86UD1 273 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 OR4K5Q8NGD3 323 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 OR1K1Q8NGR3 316 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 PIK3IP1Q96FE7 263 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 SLC25A44Q96H78 314 aaPredicted RBP13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 ESRP2Q9H6T0 727 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 SLC17A5Q9NRA2 495 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 MAGED1Q9Y5V3 778 aaPredicted RBP13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 SLC25A15Q9Y619 301 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 FBN2P35556 2912 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 TRBV4-1A0A0J9YWV2 114 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 SH3PXD2BA1X283 911 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 ZNF99A8MXY4 864 aaPredicted RBP13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 CLOCKO15516 846 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 SERPINI2O75830 405 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 WNT11O96014 354 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 IGHMP01871 453 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 F13BP05160 661 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 RRM2P31350 389 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 OMPP47874 163 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 CSNK1A1P48729 337 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 CAMK2DQ13557 499 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 FHL1Q13642 323 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 LAPTM4AQ15012 233 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 ZBED5Q49AG3 693 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 NCMAPQ5T1S8 102 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 C9orf135Q5VTT2 229 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 ANKRD16Q6P6B7 361 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 ZNF627Q7L945 461 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 CCDC36Q8IYA8 594 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 LINC00471Q8N535 108 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 WDR31Q8NA23 367 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 LRRC75AQ8NAA5 344 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 OR6N1Q8NGY5 312 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 OR52J3Q8NH60 311 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 ASB10Q8WXI3 467 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 TMEM54Q969K7 222 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 ZNF566Q969W8 418 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 PLPPR2Q96GM1 343 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 ALPK1Q96QP1 1244 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 TMEM204Q9BSN7 226 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 CADM1Q9BY67 442 aaKnown RBP13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 NDEL1Q9GZM8 345 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 TXNIPQ9H3M7 391 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 PLEKHF2Q9H8W4 249 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 CRLF2Q9HC73 371 aa13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 MOV10Q9HCE1 1003 aaKnown RBP13.19□□□□□ -0.3
CSNK1E-210ENST00000442216 ARPC4-TTLL3A0A0A6YYG9 625 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 MCIDASD6RGH6 385 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 M0R3G1 203 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 CDC42EP2O14613 210 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 IGHG1P01857 330 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 PGA4P0DJD7 388 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 PGA3P0DJD8 388 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 RAP2AP10114 183 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 NR2C1P13056 603 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 IFNGR2P38484 337 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 GPR4P46093 362 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 LIMS1P48059 325 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 FLOT2Q14254 428 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 GK3PQ14409 553 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 SEC23BQ15437 767 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 HIST3H3Q16695 136 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 CEACAM16Q2WEN9 425 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 TBRG1Q3YBR2 411 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 PHYHD1Q5SRE7 291 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 CARD17Q5XLA6 110 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 FAM205BPQ63HN1 556 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 KLHL17Q6TDP4 642 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 KLHL24Q6TFL4 600 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 OR52N5Q8NH56 324 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 MOSPD2Q8NHP6 518 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 BCL2L2Q92843 193 aaPredicted RBP13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 NINJ1Q92982 152 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 FAM46AQ96IP4 442 aaKnown RBP13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 TNFRSF13CQ96RJ3 184 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 MRPL13Q9BYD1 178 aaKnown RBP13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 ULBP2Q9BZM5 246 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 GLTPQ9NZD2 209 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 TMCC3Q9ULS5 477 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 AURKCQ9UQB9 309 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 POMPQ9Y244 141 aa13.18□□□□□ -0.3
CSNK1E-210ENST00000442216 NAV2Q8IVL1 2488 aa13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 DSCAMO60469 2012 aa13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 TRAV27A0A087WT01 109 aa13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 A0A1W2PPR1 153 aa13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 PTP4A3O75365 173 aa13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 ACADSP16219 412 aa13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 CDH2P19022 906 aaPredicted RBP13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 ARF1P84077 181 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 MELKQ14680 651 aa13.17□□□□□ -0.3
CSNK1E-210ENST00000442216 ACKR1Q16570 336 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms