RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 UPK3AO75631 287 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 FGF1P05230 155 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 MAGP20916 626 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 HSD17B2P37059 387 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 YAP1P46937 504 aaKnown RBP3□□□□□ -1.93
PFDN4-202ENST00000441080 NPBWR2P48146 333 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 SUB1P53999 127 aaKnown RBP eCLIP3□□□□□ -1.93
PFDN4-202ENST00000441080 PFN3P60673 137 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 ACTA1P68133 377 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 PTGES3Q15185 160 aaKnown RBP3□□□□□ -1.93
PFDN4-202ENST00000441080 GUCA2BQ16661 112 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 ZNF691Q5VV52 312 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 IGFL3Q6UXB1 125 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 LRRC74BQ6ZQY2 392 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 H2BFWTQ7Z2G1 175 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 ZNF557Q8N988 423 aaPredicted RBP3□□□□□ -1.93
PFDN4-202ENST00000441080 OR8J1Q8NGP2 316 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 SDR42E1Q8WUS8 393 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 DNAJC19Q96DA6 116 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 PLEKHA8Q96JA3 519 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 HSFY1Q96LI6 401 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 ZBTB18Q99592 522 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 NT5C3AQ9H0P0 336 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 TPK1Q9H3S4 243 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 ANKRD19PQ9H560 264 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 FN3KRPQ9HA64 309 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 CTPS2Q9NRF8 586 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 TBX21Q9UL17 535 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 PEX16Q9Y5Y5 336 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 NPTNQ9Y639 398 aa3□□□□□ -1.93
PFDN4-202ENST00000441080 PRSS37A4D1T9 235 aa2.99□□□□□ -1.93
PFDN4-202ENST00000441080 XKRYO14609 159 aa2.99□□□□□ -1.93
PFDN4-202ENST00000441080 UBTFL1P0CB47 393 aaPredicted RBP2.99□□□□□ -1.93
PFDN4-202ENST00000441080 IGHV3-43DP0DP04 118 aa2.99□□□□□ -1.93
PFDN4-202ENST00000441080 ATP1B2P14415 290 aaPredicted RBP2.99□□□□□ -1.93
PFDN4-202ENST00000441080 ATP5C1P36542 298 aaKnown RBP2.99□□□□□ -1.93
PFDN4-202ENST00000441080 GPR6P46095 362 aaPredicted RBP2.99□□□□□ -1.93
PFDN4-202ENST00000441080 GYG1P46976 350 aa2.99□□□□□ -1.93
PFDN4-202ENST00000441080 RSPO1Q2MKA7 263 aaPredicted RBP2.99□□□□□ -1.93
PFDN4-202ENST00000441080 KCTD21Q4G0X4 260 aa2.99□□□□□ -1.93
PFDN4-202ENST00000441080 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
PFDN4-202ENST00000441080 ZNF596Q8TC21 504 aa2.99□□□□□ -1.93
PFDN4-202ENST00000441080 ACTRT1Q8TDG2 376 aa2.99□□□□□ -1.93
PFDN4-202ENST00000441080 STARD8Q92502 1023 aa2.99□□□□□ -1.93
PFDN4-202ENST00000441080 AURKBQ96GD4 344 aaPredicted RBP2.99□□□□□ -1.93
PFDN4-202ENST00000441080 ROPN1BQ9BZX4 212 aaPredicted RBP2.99□□□□□ -1.93
PFDN4-202ENST00000441080 MFFQ9GZY8 342 aa2.99□□□□□ -1.93
PFDN4-202ENST00000441080 TM9SF3Q9HD45 589 aa2.99□□□□□ -1.93
PFDN4-202ENST00000441080 ZNF639Q9UID6 485 aa2.99□□□□□ -1.93
PFDN4-202ENST00000441080 PACSIN2Q9UNF0 486 aaPredicted RBP2.99□□□□□ -1.93
PFDN4-202ENST00000441080 IGLV11-55A0A075B6I3 123 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 OR52A4PA6NMU1 304 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 CXCL11O14625 94 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 B4GALT2O60909 372 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 SPAG7O75391 227 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 ERLIN2O94905 339 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 IGLV2-23P01705 113 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 IGHV2-5P01817 119 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 ETS2P15036 469 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 ZNF30P17039 623 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 RPS9P46781 194 aaKnown RBP2.98□□□□□ -1.93
PFDN4-202ENST00000441080 TFPI2P48307 235 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 UBE2AP49459 152 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 CDH4P55283 916 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 ZNF77Q15935 545 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 C6orf226Q5I0X4 101 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 KDM7AQ6ZMT4 941 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 H2AFVQ71UI9 128 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 PSTKQ8IV42 348 aaKnown RBP2.98□□□□□ -1.93
PFDN4-202ENST00000441080 PCP2Q8IVA1 136 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 SAXO1Q8IYX7 474 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 PUSL1Q8N0Z8 303 aaKnown RBP2.98□□□□□ -1.93
PFDN4-202ENST00000441080 OR1L6Q8NGR2 347 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 OR2G2Q8NGZ5 317 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 CD300LFQ8TDQ1 290 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 SGK3Q96BR1 496 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 MED8Q96G25 268 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 C12orf42Q96LP6 360 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 IFI27L2Q9H2X8 130 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 UGT1A7Q9HAW7 530 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 UGT1A10Q9HAW8 530 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 UGT1A8Q9HAW9 530 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 MSH6P52701 1360 aa2.98□□□□□ -1.93
PFDN4-202ENST00000441080 NFASCO94856 1347 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 CDHR2Q9BYE9 1310 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 ARID1AO14497 2285 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 IGKV1D-13A0A0B4J2D9 117 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 ERVV-1B6SEH8 477 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 FOXE1O00358 373 aaPredicted RBP2.97□□□□□ -1.93
PFDN4-202ENST00000441080 CCL21O00585 134 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 DLGAP1O14490 977 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 CD5LO43866 347 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 MED6O75586 246 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 BGLAPP02818 100 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 GAPDHP04406 335 aaKnown RBP2.97□□□□□ -1.93
PFDN4-202ENST00000441080 C2P06681 752 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 IGKV1-13P0DP09 117 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 VHLP40337 213 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 MNAT1P51948 309 aa2.97□□□□□ -1.93
PFDN4-202ENST00000441080 ZNF136P52737 540 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms