RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 ADAM8P78325 824 aa20.66■□□□□ 0.9
VARS-217ENST00000440048 LSM11P83369 360 aaKnown RBP eCLIP20.66■□□□□ 0.9
VARS-217ENST00000440048 SPOCK1Q08629 439 aa20.66■□□□□ 0.9
VARS-217ENST00000440048 TRAM2Q15035 370 aa20.66■□□□□ 0.9
VARS-217ENST00000440048 FXNQ16595 210 aa20.66■□□□□ 0.9
VARS-217ENST00000440048 SAMD4BQ5PRF9 694 aaKnown RBP20.66■□□□□ 0.9
VARS-217ENST00000440048 TSEN54Q7Z6J9 526 aaKnown RBP20.66■□□□□ 0.9
VARS-217ENST00000440048 CCDC197Q8NCU1 140 aa20.66■□□□□ 0.9
VARS-217ENST00000440048 TMEM171Q8WVE6 324 aa20.66■□□□□ 0.9
VARS-217ENST00000440048 LIPHQ8WWY8 451 aa20.66■□□□□ 0.9
VARS-217ENST00000440048 RADILQ96JH8 1075 aa20.66■□□□□ 0.9
VARS-217ENST00000440048 TMUB1Q9BVT8 246 aa20.66■□□□□ 0.9
VARS-217ENST00000440048 B3GAT2Q9NPZ5 323 aa20.66■□□□□ 0.9
VARS-217ENST00000440048 DCAF13Q9NV06 445 aaKnown RBP20.66■□□□□ 0.9
VARS-217ENST00000440048 ZNF469Q96JG9 3925 aaPredicted RBP20.66■□□□□ 0.9
VARS-217ENST00000440048 ARPC4-TTLL3A0A0A6YYG9 625 aa20.65■□□□□ 0.9
VARS-217ENST00000440048 CDH11P55287 796 aa20.65■□□□□ 0.9
VARS-217ENST00000440048 NKX6-1P78426 367 aaPredicted RBP20.65■□□□□ 0.9
VARS-217ENST00000440048 MXRA7P84157 204 aa20.65■□□□□ 0.9
VARS-217ENST00000440048 RPL18Q07020 188 aaKnown RBP20.65■□□□□ 0.9
VARS-217ENST00000440048 C16orf89Q6UX73 402 aa20.65■□□□□ 0.9
VARS-217ENST00000440048 KRTAP1-3Q8IUG1 177 aa20.65■□□□□ 0.9
VARS-217ENST00000440048 DEFB107AQ8IZN7 70 aa20.65■□□□□ 0.9
VARS-217ENST00000440048 LRRC75A-AS1Q8N1F1 130 aa20.65■□□□□ 0.9
VARS-217ENST00000440048 OR6N1Q8NGY5 312 aa20.65■□□□□ 0.9
VARS-217ENST00000440048 OR6X1Q8NH79 312 aa20.65■□□□□ 0.9
VARS-217ENST00000440048 SMAP2Q8WU79 429 aaPredicted RBP20.65■□□□□ 0.9
VARS-217ENST00000440048 ADAD1Q96M93 576 aaKnown RBP20.65■□□□□ 0.9
VARS-217ENST00000440048 GORASP2Q9H8Y8 452 aa20.65■□□□□ 0.9
VARS-217ENST00000440048 NDE1Q9NXR1 346 aa20.65■□□□□ 0.9
VARS-217ENST00000440048 CISD1Q9NZ45 108 aaKnown RBP20.65■□□□□ 0.9
VARS-217ENST00000440048 LAMP3Q9UQV4 416 aa20.65■□□□□ 0.9
VARS-217ENST00000440048 ENPP4Q9Y6X5 453 aa20.65■□□□□ 0.9
VARS-217ENST00000440048 ZNF99A8MXY4 864 aaPredicted RBP20.64■□□□□ 0.89
VARS-217ENST00000440048 SOD3P08294 240 aa20.64■□□□□ 0.89
VARS-217ENST00000440048 DANCRP0C864 163 aa20.64■□□□□ 0.89
VARS-217ENST00000440048 IFI30P13284 250 aa20.64■□□□□ 0.89
VARS-217ENST00000440048 HOXB1P14653 301 aaPredicted RBP20.64■□□□□ 0.89
VARS-217ENST00000440048 MSX2P35548 267 aaPredicted RBP20.64■□□□□ 0.89
VARS-217ENST00000440048 AQP2P41181 271 aa20.64■□□□□ 0.89
VARS-217ENST00000440048 MNAT1P51948 309 aa20.64■□□□□ 0.89
VARS-217ENST00000440048 TUBA1BP68363 451 aa20.64■□□□□ 0.89
VARS-217ENST00000440048 TUBA4AP68366 448 aa20.64■□□□□ 0.89
VARS-217ENST00000440048 MELKQ14680 651 aa20.64■□□□□ 0.89
VARS-217ENST00000440048 SLC22A25Q6T423 547 aa20.64■□□□□ 0.89
VARS-217ENST00000440048 TUBA1AQ71U36 451 aa20.64■□□□□ 0.89
VARS-217ENST00000440048 FAM86B1Q8N7N1 296 aa20.64■□□□□ 0.89
VARS-217ENST00000440048 BPIFA2Q96DR5 249 aa20.64■□□□□ 0.89
VARS-217ENST00000440048 ULBP2Q9BZM5 246 aa20.64■□□□□ 0.89
VARS-217ENST00000440048 ADAM21Q9UKJ8 722 aa20.64■□□□□ 0.89
VARS-217ENST00000440048 SAMD4AQ9UPU9 718 aaKnown RBP20.64■□□□□ 0.89
VARS-217ENST00000440048 NF1P21359 2839 aa20.63■□□□□ 0.89
VARS-217ENST00000440048 HTR3EA5X5Y0 456 aa20.63■□□□□ 0.89
VARS-217ENST00000440048 SEC14L2O76054 403 aa20.63■□□□□ 0.89
VARS-217ENST00000440048 F13BP05160 661 aa20.63■□□□□ 0.89
VARS-217ENST00000440048 TSPAN19P0C672 248 aa20.63■□□□□ 0.89
VARS-217ENST00000440048 CSNK1A1P48729 337 aa20.63■□□□□ 0.89
VARS-217ENST00000440048 PGGHGQ32M88 737 aa20.63■□□□□ 0.89
VARS-217ENST00000440048 CYP4Z1Q86W10 505 aa20.63■□□□□ 0.89
VARS-217ENST00000440048 NRMQ8IXM6 262 aa20.63■□□□□ 0.89
VARS-217ENST00000440048 WFDC11Q8NEX6 87 aa20.63■□□□□ 0.89
VARS-217ENST00000440048 MOSPD2Q8NHP6 518 aa20.63■□□□□ 0.89
VARS-217ENST00000440048 TMEM54Q969K7 222 aa20.63■□□□□ 0.89
VARS-217ENST00000440048 PERPQ96FX8 193 aa20.63■□□□□ 0.89
VARS-217ENST00000440048 NSL1Q96IY1 281 aa20.63■□□□□ 0.89
VARS-217ENST00000440048 CXorf56Q9H5V9 222 aa20.63■□□□□ 0.89
VARS-217ENST00000440048 MAGEL2Q9UJ55 1249 aa20.63■□□□□ 0.89
VARS-217ENST00000440048 E7EQL1 145 aa20.62■□□□□ 0.89
VARS-217ENST00000440048 TMCC2O75069 709 aa20.62■□□□□ 0.89
VARS-217ENST00000440048 BCL10O95999 233 aa20.62■□□□□ 0.89
VARS-217ENST00000440048 PAX7P23759 505 aa20.62■□□□□ 0.89
VARS-217ENST00000440048 MEX3DQ86XN8 651 aaKnown RBP20.62■□□□□ 0.89
VARS-217ENST00000440048 DEPDC4Q8N2C3 294 aa20.62■□□□□ 0.89
VARS-217ENST00000440048 ACOT11Q8WXI4 607 aaPredicted RBP20.62■□□□□ 0.89
VARS-217ENST00000440048 SLC25A44Q96H78 314 aaPredicted RBP20.62■□□□□ 0.89
VARS-217ENST00000440048 C7orf34Q96L11 122 aa20.62■□□□□ 0.89
VARS-217ENST00000440048 GSX2Q9BZM3 304 aa20.62■□□□□ 0.89
VARS-217ENST00000440048 NMNAT1Q9HAN9 279 aaPredicted RBP20.62■□□□□ 0.89
VARS-217ENST00000440048 INIPQ9NRY2 104 aa20.62■□□□□ 0.89
VARS-217ENST00000440048 GLTPQ9NZD2 209 aa20.62■□□□□ 0.89
VARS-217ENST00000440048 NDUFAF4Q9P032 175 aa20.62■□□□□ 0.89
VARS-217ENST00000440048 POU2F3Q9UKI9 436 aa20.62■□□□□ 0.89
VARS-217ENST00000440048 POFUT2Q9Y2G5 429 aa20.62■□□□□ 0.89
VARS-217ENST00000440048 A0A087WUU8 490 aa20.61■□□□□ 0.89
VARS-217ENST00000440048 IGHV1-18A0A0C4DH31 117 aa20.61■□□□□ 0.89
VARS-217ENST00000440048 A0A1W2PRG6 482 aa20.61■□□□□ 0.89
VARS-217ENST00000440048 B2RBV5 119 aa20.61■□□□□ 0.89
VARS-217ENST00000440048 ARHGEF9O43307 516 aa20.61■□□□□ 0.89
VARS-217ENST00000440048 PAX1P15863 534 aa20.61■□□□□ 0.89
VARS-217ENST00000440048 MAKP20794 623 aa20.61■□□□□ 0.89
VARS-217ENST00000440048 PTH2RP49190 550 aa20.61■□□□□ 0.89
VARS-217ENST00000440048 RPS4XP62701 263 aaKnown RBP20.61■□□□□ 0.89
VARS-217ENST00000440048 PRKCDQ05655 676 aa20.61■□□□□ 0.89
VARS-217ENST00000440048 LAPTM4AQ15012 233 aa20.61■□□□□ 0.89
VARS-217ENST00000440048 SHEQ5VZ18 495 aa20.61■□□□□ 0.89
VARS-217ENST00000440048 TBPL2Q6SJ96 375 aa20.61■□□□□ 0.89
VARS-217ENST00000440048 B3GLCTQ6Y288 498 aa20.61■□□□□ 0.89
VARS-217ENST00000440048 RNF113BQ8IZP6 322 aaKnown RBP20.61■□□□□ 0.89
VARS-217ENST00000440048 ZNF566Q969W8 418 aa20.61■□□□□ 0.89
VARS-217ENST00000440048 SLC38A2Q96QD8 506 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms