RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 TMPRSS11FQ6ZWK6 438 aa13.67□□□□□ -0.22
TREX1-201ENST00000433541 ACBD4Q8NC06 268 aa13.67□□□□□ -0.22
TREX1-201ENST00000433541 OR52N5Q8NH56 324 aa13.67□□□□□ -0.22
TREX1-201ENST00000433541 LIPHQ8WWY8 451 aa13.67□□□□□ -0.22
TREX1-201ENST00000433541 HSD17B8Q92506 261 aa13.67□□□□□ -0.22
TREX1-201ENST00000433541 C14orf79Q96F83 325 aa13.67□□□□□ -0.22
TREX1-201ENST00000433541 PIK3IP1Q96FE7 263 aa13.67□□□□□ -0.22
TREX1-201ENST00000433541 TNFRSF13CQ96RJ3 184 aa13.67□□□□□ -0.22
TREX1-201ENST00000433541 USB1Q9BQ65 265 aaKnown RBP13.67□□□□□ -0.22
TREX1-201ENST00000433541 POLDIP3Q9BY77 421 aaKnown RBP13.67□□□□□ -0.22
TREX1-201ENST00000433541 LINC00470Q9BZP3 86 aa13.67□□□□□ -0.22
TREX1-201ENST00000433541 OR10A4Q9H209 315 aa13.67□□□□□ -0.22
TREX1-201ENST00000433541 CRLF2Q9HC73 371 aa13.67□□□□□ -0.22
TREX1-201ENST00000433541 NGBQ9NPG2 151 aa13.67□□□□□ -0.22
TREX1-201ENST00000433541 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.67□□□□□ -0.22
TREX1-201ENST00000433541 HIF3AQ9Y2N7 669 aa13.67□□□□□ -0.22
TREX1-201ENST00000433541 A0A1W2PR80 420 aa13.66□□□□□ -0.22
TREX1-201ENST00000433541 CDC42EP2O14613 210 aa13.66□□□□□ -0.22
TREX1-201ENST00000433541 ZNF432O94892 652 aa13.66□□□□□ -0.22
TREX1-201ENST00000433541 CD47Q08722 323 aa13.66□□□□□ -0.22
TREX1-201ENST00000433541 PPA1Q15181 289 aa13.66□□□□□ -0.22
TREX1-201ENST00000433541 ACKR1Q16570 336 aa13.66□□□□□ -0.22
TREX1-201ENST00000433541 CEACAM16Q2WEN9 425 aa13.66□□□□□ -0.22
TREX1-201ENST00000433541 ZNF295-AS1Q8N0V1 137 aa13.66□□□□□ -0.22
TREX1-201ENST00000433541 LINC00471Q8N535 108 aa13.66□□□□□ -0.22
TREX1-201ENST00000433541 OR6X1Q8NH79 312 aa13.66□□□□□ -0.22
TREX1-201ENST00000433541 FANK1Q8TC84 345 aa13.66□□□□□ -0.22
TREX1-201ENST00000433541 SLC25A44Q96H78 314 aaPredicted RBP13.66□□□□□ -0.22
TREX1-201ENST00000433541 GPR35Q9HC97 309 aa13.66□□□□□ -0.22
TREX1-201ENST00000433541 STX18Q9P2W9 335 aaKnown RBP13.66□□□□□ -0.22
TREX1-201ENST00000433541 LYVE1Q9Y5Y7 322 aa13.66□□□□□ -0.22
TREX1-201ENST00000433541 DCHS2Q6V1P9 2916 aa13.66□□□□□ -0.22
TREX1-201ENST00000433541 PRR14LQ5THK1 2151 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 OR5H1A6NKK0 313 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 FKBP6O75344 327 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 SEC14L2O76054 403 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 NDUFB2O95178 105 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 PRF1P14222 555 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 ACVR1BP36896 505 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 CAPZA2P47755 286 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 OMPP47874 163 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 SH3BGRP55822 239 aaPredicted RBP13.65□□□□□ -0.22
TREX1-201ENST00000433541 UBE2NP61088 152 aaKnown RBP13.65□□□□□ -0.22
TREX1-201ENST00000433541 MYBPC1Q00872 1141 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 TAB1Q15750 504 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 TIMM23BQ5SRD1 257 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 ASRGL1Q7L266 308 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 C20orf196Q8IYI0 205 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 TMEM123Q8N131 208 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 SYT14Q8NB59 555 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 OR9Q2Q8NGE9 314 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 GNPDA2Q8TDQ7 276 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 KATNB1Q9BVA0 655 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 CLEC4MQ9H2X3 399 aaPredicted RBP13.65□□□□□ -0.22
TREX1-201ENST00000433541 TXNIPQ9H3M7 391 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 HEATR1Q9H583 2144 aaKnown RBP13.65□□□□□ -0.22
TREX1-201ENST00000433541 GRHPRQ9UBQ7 328 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 IL20RAQ9UHF4 553 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 POFUT2Q9Y2G5 429 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 UNC79Q9P2D8 2635 aa13.65□□□□□ -0.22
TREX1-201ENST00000433541 A0A096LPE4 126 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 A0A1W2PPZ6 126 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 TCRBV3S1A0A5B6 114 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 XKRYO14609 159 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 WNT11O96014 354 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 ACADSP16219 412 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 CRYGSP22914 178 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 RPL27P61353 136 aaKnown RBP13.64□□□□□ -0.23
TREX1-201ENST00000433541 RPS4XP62701 263 aaKnown RBP13.64□□□□□ -0.23
TREX1-201ENST00000433541 ERVK-25P63136 954 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 GABRA6Q16445 453 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 HIKESHIQ53FT3 197 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 BEX5Q5H9J7 111 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 SMARCD3Q6STE5 483 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 LINGO2Q7L985 606 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 P2RY8Q86VZ1 359 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 C1orf162Q8NEQ5 155 aaPredicted RBP13.64□□□□□ -0.23
TREX1-201ENST00000433541 NOXO1Q8NFA2 376 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 ASB10Q8WXI3 467 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 LRR1Q96L50 414 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 ZNF570Q96NI8 536 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 RAB3IPQ96QF0 476 aaPredicted RBP13.64□□□□□ -0.23
TREX1-201ENST00000433541 C1QTNF6Q9BXI9 259 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 GLTPQ9NZD2 209 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 AMDHD2Q9Y303 409 aa13.64□□□□□ -0.23
TREX1-201ENST00000433541 A6NIZ1 184 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 TIPRLO75663 272 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 THBDP07204 575 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 NR2C1P13056 603 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 FPR3P25089 353 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 LIMS1P48059 325 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 ZNF83P51522 516 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 ZNF84P51523 738 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 ARHGDIAP52565 204 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 RAP1BP61224 184 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 RAP1AP62834 184 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 ARF1P84077 181 aaKnown RBP13.63□□□□□ -0.23
TREX1-201ENST00000433541 DAZAP2Q15038 168 aaPredicted RBP13.63□□□□□ -0.23
TREX1-201ENST00000433541 PHYHD1Q5SRE7 291 aa13.63□□□□□ -0.23
TREX1-201ENST00000433541 FAM205BPQ63HN1 556 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms