RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 ZNF611Q8N823 705 aa14.88□□□□□ -0.03
UBE3D-204ENST00000430071 PAPD5Q8NDF8 572 aaKnown RBP14.88□□□□□ -0.03
UBE3D-204ENST00000430071 APH1AQ96BI3 265 aa14.88□□□□□ -0.03
UBE3D-204ENST00000430071 C18orf12Q96KH6 178 aa14.88□□□□□ -0.03
UBE3D-204ENST00000430071 NAA11Q9BSU3 229 aaPredicted RBP14.88□□□□□ -0.03
UBE3D-204ENST00000430071 SLC7A10Q9NS82 523 aa14.88□□□□□ -0.03
UBE3D-204ENST00000430071 EMC3Q9P0I2 261 aa14.88□□□□□ -0.03
UBE3D-204ENST00000430071 RNF115Q9Y4L5 304 aa14.88□□□□□ -0.03
UBE3D-204ENST00000430071 H7C1Q1 480 aa14.87□□□□□ -0.03
UBE3D-204ENST00000430071 FKBP6O75344 327 aa14.87□□□□□ -0.03
UBE3D-204ENST00000430071 MT-ATP6P00846 226 aa14.87□□□□□ -0.03
UBE3D-204ENST00000430071 IGF2P01344 180 aa14.87□□□□□ -0.03
UBE3D-204ENST00000430071 CD3EP07766 207 aa14.87□□□□□ -0.03
UBE3D-204ENST00000430071 FOSL1P15407 271 aa14.87□□□□□ -0.03
UBE3D-204ENST00000430071 LIMS1P48059 325 aa14.87□□□□□ -0.03
UBE3D-204ENST00000430071 SMIM11AP58511 58 aa14.87□□□□□ -0.03
UBE3D-204ENST00000430071 LGALS3BPQ08380 585 aa14.87□□□□□ -0.03
UBE3D-204ENST00000430071 KPNB1Q14974 876 aaKnown RBP14.87□□□□□ -0.03
UBE3D-204ENST00000430071 TSPO2Q5TGU0 170 aa14.87□□□□□ -0.03
UBE3D-204ENST00000430071 CASP12Q6UXS9 341 aa14.87□□□□□ -0.03
UBE3D-204ENST00000430071 MBOAT2Q6ZWT7 520 aa14.87□□□□□ -0.03
UBE3D-204ENST00000430071 OR52N5Q8NH56 324 aa14.87□□□□□ -0.03
UBE3D-204ENST00000430071 SGTBQ96EQ0 304 aa14.87□□□□□ -0.03
UBE3D-204ENST00000430071 POM121Q96HA1 1249 aa14.87□□□□□ -0.03
UBE3D-204ENST00000430071 ZNF385AQ96PM9 386 aaKnown RBP14.87□□□□□ -0.03
UBE3D-204ENST00000430071 C1QTNF6Q9BXI9 259 aa14.87□□□□□ -0.03
UBE3D-204ENST00000430071 LAMP3Q9UQV4 416 aa14.87□□□□□ -0.03
UBE3D-204ENST00000430071 OR5H1A6NKK0 313 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 SHISA9B4DS77 424 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 PDLIM1O00151 329 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 ARHGEF9O43307 516 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 MRPL33O75394 65 aaKnown RBP14.86□□□□□ -0.03
UBE3D-204ENST00000430071 OR7A10O76100 309 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 INHBBP09529 407 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 DANCRP0C864 163 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 IFI30P13284 250 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 FUT1P19526 365 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 MAKP20794 623 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 GTF2E2P29084 291 aaKnown RBP14.86□□□□□ -0.03
UBE3D-204ENST00000430071 PRKCDQ05655 676 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 SPOCK1Q08629 439 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 PPP1R8Q12972 351 aaKnown RBP14.86□□□□□ -0.03
UBE3D-204ENST00000430071 MFSD13AQ14CX5 517 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 OR2T5Q6IEZ7 315 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 H1FNTQ75WM6 255 aaPredicted RBP14.86□□□□□ -0.03
UBE3D-204ENST00000430071 RNF113BQ8IZP6 322 aaKnown RBP14.86□□□□□ -0.03
UBE3D-204ENST00000430071 KDM8Q8N371 416 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 OR4K5Q8NGD3 323 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 OR4C15Q8NGM1 316 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 OR2T29Q8NH02 315 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 BPIFA2Q96DR5 249 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 ASPNQ9BXN1 380 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 GSX2Q9BZM3 304 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 FKRPQ9H9S5 495 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 MRPL39Q9NYK5 338 aaKnown RBP14.86□□□□□ -0.03
UBE3D-204ENST00000430071 CORINQ9Y5Q5 1042 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 LYVE1Q9Y5Y7 322 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 JMJD1CQ15652 2540 aa14.86□□□□□ -0.03
UBE3D-204ENST00000430071 SH3PXD2BA1X283 911 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 ANKRD65E5RJM6 399 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 GPR171O14626 319 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 SMAD7O15105 426 aaKnown RBP14.85□□□□□ -0.03
UBE3D-204ENST00000430071 HPRP00739 348 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 ASAH2BP0C7U1 165 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 HOXB6P17509 224 aaKnown RBP14.85□□□□□ -0.03
UBE3D-204ENST00000430071 HMGA2P52926 109 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 ACTR3P61158 418 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 PMS2P3Q13401 168 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 GABRA6Q16445 453 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 PGGHGQ32M88 737 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 ZNF672Q499Z4 452 aaPredicted RBP14.85□□□□□ -0.03
UBE3D-204ENST00000430071 TIMM23BQ5SRD1 257 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 TMEM225Q6GV28 225 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 SCAIQ8N9R8 606 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 WDR31Q8NA23 367 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 ADPRHL1Q8NDY3 354 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 OR9K2Q8NGE7 335 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 OR5J2Q8NH18 312 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 TMEM171Q8WVE6 324 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 DUS3LQ96G46 650 aaKnown RBP14.85□□□□□ -0.03
UBE3D-204ENST00000430071 RAB3IPQ96QF0 476 aaPredicted RBP14.85□□□□□ -0.03
UBE3D-204ENST00000430071 DENND2DQ9H6A0 471 aaPredicted RBP14.85□□□□□ -0.03
UBE3D-204ENST00000430071 ESRP2Q9H6T0 727 aaKnown RBP14.85□□□□□ -0.03
UBE3D-204ENST00000430071 NANSQ9NR45 359 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 ZNF701Q9NV72 531 aaPredicted RBP14.85□□□□□ -0.03
UBE3D-204ENST00000430071 ASB6Q9NWX5 421 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 B3GAT1Q9P2W7 334 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 MALT1Q9UDY8 824 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 ZNF229Q9UJW7 825 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 RASD1Q9Y272 281 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 B3GALT5Q9Y2C3 310 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 SLC25A15Q9Y619 301 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 CIB4A0PJX0 185 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 ERICH4A6NGS2 130 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 MS4A18H0YCH9 400 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 TNFRSF11BO00300 401 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 PLPP3O14495 311 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 NDUFS7O75251 213 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 TIPRLO75663 272 aa14.85□□□□□ -0.03
UBE3D-204ENST00000430071 KRT36O76013 467 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms