RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 AQP2P41181 271 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 CAMK2DQ13557 499 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 KIAA0040Q15053 153 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 PROX2Q3B8N5 592 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 FAM219BQ5XKK7 198 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 LRRC56Q8IYG6 542 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-207ENST00000429896 ANKRD9Q96BM1 317 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-207ENST00000429896 AMBRA1Q9C0C7 1298 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 OLAHQ9NV23 265 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 GOLGA4Q13439 2230 aaKnown RBP11.8□□□□□ -0.52
PTCH1-207ENST00000429896 GOSR2O14653 212 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 SLC16A14Q7RTX9 510 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 OR4N2Q8NGD1 307 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 RGCCQ9H4X1 137 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 PLEK2Q9NYT0 353 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 HSPB6O14558 160 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 WISP3O95389 354 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-207ENST00000429896 LCATP04180 440 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 EMDP50402 254 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 AKR1C2P52895 323 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 BIDP55957 195 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 CAV3P56539 151 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 PGGHGQ32M88 737 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 PTRH1Q86Y79 214 aaKnown RBP11.8□□□□□ -0.52
PTCH1-207ENST00000429896 HOXB13Q92826 284 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-207ENST00000429896 NELFAQ9H3P2 528 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 COPZ2Q9P299 210 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 GMPR2Q9P2T1 348 aaKnown RBP11.8□□□□□ -0.52
PTCH1-207ENST00000429896 RPH3ALQ9UNE2 315 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 MDFIC2A0A1B0GVS7 189 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 ACTL6BO94805 426 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 YES1P07947 543 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 KRBOX4Q5JUW0 171 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 DCAF10Q5QP82 559 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 TBPL2Q6SJ96 375 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 UBE3DQ7Z6J8 389 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 OR51T1Q8NGJ9 327 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 TRUB1Q8WWH5 349 aaKnown RBP11.79□□□□□ -0.52
PTCH1-207ENST00000429896 SLCO1B1Q9Y6L6 691 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 PDCD11Q14690 1871 aaKnown RBP11.79□□□□□ -0.52
PTCH1-207ENST00000429896 F5H0A9 414 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-207ENST00000429896 FOXS1O43638 330 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 AKR7A3O95154 331 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 IFNA5P01569 189 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 RAC2P15153 192 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 FRKP42685 505 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-207ENST00000429896 MTNR1AP48039 350 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 TNFRSF13CQ96RJ3 184 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 INTS14Q96SY0 518 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 PILRAQ9UKJ1 303 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 LSM5Q9Y4Y9 91 aaKnown RBP11.79□□□□□ -0.52
PTCH1-207ENST00000429896 HMX3A6NHT5 357 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 NKX2-2O95096 273 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 WNT11O96014 354 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 CNR1P21554 472 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 F8A1P23610 371 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 DCKP27707 260 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 C6orf141Q5SZD1 244 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 RIMKLAQ8IXN7 391 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 ACBD7Q8N6N7 88 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 OR10G3Q8NGC4 313 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 ZMYND19Q96E35 227 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-207ENST00000429896 PROCRQ9UNN8 238 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 PCDHGB6Q9Y5F9 930 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 FAM230AA0A1W2PPH8 454 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 LINC01387J3KSC0 135 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 GNB3P16520 340 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 CLDN15P56746 228 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 TSPYL5Q86VY4 417 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-207ENST00000429896 SIRT5Q9NXA8 310 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 TRGV5A0A0B4J1U4 118 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 A0A1W2PPW3 197 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 RBBP9O75884 186 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 GABRR1P24046 479 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 TUBA1BP68363 451 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 TUBA1AQ71U36 451 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 SLC35D2Q76EJ3 337 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 NUBPLQ8TB37 319 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 TMEM246Q9BRR3 403 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 PRR14Q9BWN1 585 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 ANK1P16157 1881 aa11.79□□□□□ -0.52
PTCH1-207ENST00000429896 C12orf71A8MTZ7 269 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 ZNF14P17017 642 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-207ENST00000429896 SNRPD2P62316 118 aaKnown RBP11.78□□□□□ -0.52
PTCH1-207ENST00000429896 INSM1Q01101 510 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-207ENST00000429896 MRM1Q6IN84 353 aaKnown RBP11.78□□□□□ -0.52
PTCH1-207ENST00000429896 TOMM40LQ969M1 308 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 OR5H15A6NDH6 313 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 B8ZZF3 427 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 KIAA0513O60268 411 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 CRTAPO75718 401 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-207ENST00000429896 VAMP5O95183 116 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 ZNF791Q3KP31 576 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-207ENST00000429896 LRRC18Q8N456 261 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 KATNB1Q9BVA0 655 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 TRPM6Q9BX84 2022 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 CYR61O00622 381 aa11.78□□□□□ -0.52
PTCH1-207ENST00000429896 RGS9O75916 674 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-207ENST00000429896 NKX2-5P52952 324 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-207ENST00000429896 ZNF404Q494X3 552 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms