RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 MPGP29372 298 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 SLC9A3P48764 834 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 DAP3P51398 398 aaKnown RBP10.97□□□□□ -0.65
SKA1-203ENST00000417656 ROR2Q01974 943 aaKnown RBP10.97□□□□□ -0.65
SKA1-203ENST00000417656 PPP1R8Q12972 351 aaKnown RBP10.97□□□□□ -0.65
SKA1-203ENST00000417656 LAPTM4AQ15012 233 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 TAB1Q15750 504 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 ACKR1Q16570 336 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 C1orf146Q5VVC0 180 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 OR2T5Q6IEZ7 315 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 ABHD12BQ7Z5M8 362 aaPredicted RBP10.97□□□□□ -0.65
SKA1-203ENST00000417656 C20orf196Q8IYI0 205 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 LRRC75AQ8NAA5 344 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 OR4C15Q8NGM1 316 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 OR6N1Q8NGY5 312 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 OR2T29Q8NH02 315 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 ASB10Q8WXI3 467 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 UTP4Q969X6 686 aaKnown RBP10.97□□□□□ -0.65
SKA1-203ENST00000417656 TNFRSF13CQ96RJ3 184 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 GPA33Q99795 319 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 CHID1Q9BWS9 393 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 MMADHCQ9H3L0 296 aaPredicted RBP10.97□□□□□ -0.65
SKA1-203ENST00000417656 REEP1Q9H902 201 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 ZNF226Q9NYT6 803 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 TMCC3Q9ULS5 477 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 SAMHD1Q9Y3Z3 626 aaKnown RBP10.97□□□□□ -0.65
SKA1-203ENST00000417656 U3KQV3 271 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 A0A1W2PR80 420 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 OR5H1A6NKK0 313 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 DEFB108AA8MXU0 73 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 CASKO14936 926 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 KLF4O43474 513 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 FKBP6O75344 327 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 CIB2O75838 187 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 KRT36O76013 467 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 SEC14L2O76054 403 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 BCL10O95999 233 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 ZNF26P17031 533 aaPredicted RBP10.96□□□□□ -0.65
SKA1-203ENST00000417656 CSNK1A1P48729 337 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 KRTAP10-9P60411 292 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 RUNX1T1Q06455 604 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 DAZAP2Q15038 168 aaPredicted RBP10.96□□□□□ -0.65
SKA1-203ENST00000417656 GABRA6Q16445 453 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 CEACAM16Q2WEN9 425 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 HMBOX1Q6NT76 420 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 PGBD2Q6P3X8 592 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 SEZ6L2Q6UXD5 910 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 ZER1Q7Z7L7 766 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 C1orf162Q8NEQ5 155 aaPredicted RBP10.96□□□□□ -0.65
SKA1-203ENST00000417656 NOXO1Q8NFA2 376 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 OR9Q2Q8NGE9 314 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 OR1K1Q8NGR3 316 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 OR52N5Q8NH56 324 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 OR6X1Q8NH79 312 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 FANK1Q8TC84 345 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 SLCO4A1Q96BD0 722 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 ADAD1Q96M93 576 aaKnown RBP10.96□□□□□ -0.65
SKA1-203ENST00000417656 TSPAN32Q96QS1 320 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 POLDIP3Q9BY77 421 aaKnown RBP10.96□□□□□ -0.65
SKA1-203ENST00000417656 ULBP2Q9BZM5 246 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 GPR35Q9HC97 309 aa10.96□□□□□ -0.65
SKA1-203ENST00000417656 CENPEQ02224 2701 aa10.96□□□□□ -0.66
SKA1-203ENST00000417656 NBPF19A0A087WUL8 3843 aa10.96□□□□□ -0.66
SKA1-203ENST00000417656 DCHS2Q6V1P9 2916 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 UNC119BA6NIH7 251 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 CTAG2O75638 210 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 CCNB2O95067 398 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 CST1P01037 141 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 IGHG1P01857 330 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 IGHMP01871 453 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 HRGP04196 525 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 PGA4P0DJD7 388 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 PGA3P0DJD8 388 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 FPR3P25089 353 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 RPL4P36578 427 aaKnown RBP10.95□□□□□ -0.66
SKA1-203ENST00000417656 IST1P53990 364 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 FXYD6P3P58550 94 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 CTXN1P60606 82 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 TGFBR3Q03167 851 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 CCNIQ14094 377 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 PPA1Q15181 289 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 TBRG1Q3YBR2 411 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 ANKDD1AQ495B1 522 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 ZBED5Q49AG3 693 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 HIKESHIQ53FT3 197 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 TIMM23BQ5SRD1 257 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 ARMC4Q5T2S8 1044 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 FBXW10Q5XX13 1052 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 HDDC2Q7Z4H3 204 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 C17orf78Q8N4C9 275 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 TMEM54Q969K7 222 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 ZNF566Q969W8 418 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 ZNF837Q96EG3 531 aaPredicted RBP10.95□□□□□ -0.66
SKA1-203ENST00000417656 PIK3IP1Q96FE7 263 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 SLC25A44Q96H78 314 aaPredicted RBP10.95□□□□□ -0.66
SKA1-203ENST00000417656 KATNB1Q9BVA0 655 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 CLEC4MQ9H2X3 399 aaPredicted RBP10.95□□□□□ -0.66
SKA1-203ENST00000417656 NELFAQ9H3P2 528 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 CRLF2Q9HC73 371 aa10.95□□□□□ -0.66
SKA1-203ENST00000417656 B3GAT2Q9NPZ5 323 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms