RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 TXNIPQ9H3M7 391 aa27.01■■□□□ 1.92
CSNK1E-206ENST00000413574 TP53P04637 393 aaPredicted RBP27.01■■□□□ 1.91
CSNK1E-206ENST00000413574 FOXG1P55316 489 aaPredicted RBP27.01■■□□□ 1.91
CSNK1E-206ENST00000413574 FBXL19-AS1Q494R0 122 aa27.01■■□□□ 1.91
CSNK1E-206ENST00000413574 ARMC4Q5T2S8 1044 aa27.01■■□□□ 1.91
CSNK1E-206ENST00000413574 FBXW9Q5XUX1 488 aa27.01■■□□□ 1.91
CSNK1E-206ENST00000413574 RASSF6Q6ZTQ3 369 aa27.01■■□□□ 1.91
CSNK1E-206ENST00000413574 ZDHHC13Q8IUH4 622 aa27.01■■□□□ 1.91
CSNK1E-206ENST00000413574 GABRG1Q8N1C3 465 aa27.01■■□□□ 1.91
CSNK1E-206ENST00000413574 PQLC1Q8N2U9 271 aa27.01■■□□□ 1.91
CSNK1E-206ENST00000413574 SMURF2Q9HAU4 748 aa27.01■■□□□ 1.91
CSNK1E-206ENST00000413574 NPDC1Q9NQX5 325 aaPredicted RBP27.01■■□□□ 1.91
CSNK1E-206ENST00000413574 SPTAN1Q13813 2472 aaKnown RBP27■■□□□ 1.91
CSNK1E-206ENST00000413574 PDLIM1O00151 329 aa27■■□□□ 1.91
CSNK1E-206ENST00000413574 AKAP8O43823 692 aaKnown RBP27■■□□□ 1.91
CSNK1E-206ENST00000413574 SLC43A1O75387 559 aa27■■□□□ 1.91
CSNK1E-206ENST00000413574 CD14P08571 375 aa27■■□□□ 1.91
CSNK1E-206ENST00000413574 DAPP51397 102 aa27■■□□□ 1.91
CSNK1E-206ENST00000413574 DAP3P51398 398 aaKnown RBP27■■□□□ 1.91
CSNK1E-206ENST00000413574 FAPQ12884 760 aa27■■□□□ 1.91
CSNK1E-206ENST00000413574 SNTB1Q13884 538 aaKnown RBP27■■□□□ 1.91
CSNK1E-206ENST00000413574 PHYHD1Q5SRE7 291 aa27■■□□□ 1.91
CSNK1E-206ENST00000413574 BEND4Q6ZU67 534 aa27■■□□□ 1.91
CSNK1E-206ENST00000413574 LINGO2Q7L985 606 aa27■■□□□ 1.91
CSNK1E-206ENST00000413574 OR6X1Q8NH79 312 aa27■■□□□ 1.91
CSNK1E-206ENST00000413574 CDH10Q9Y6N8 788 aa27■■□□□ 1.91
CSNK1E-206ENST00000413574 USP9YO00507 2555 aaPredicted RBP27■■□□□ 1.91
CSNK1E-206ENST00000413574 ANXA8P13928 327 aa26.99■■□□□ 1.91
CSNK1E-206ENST00000413574 GSTM3P21266 225 aa26.99■■□□□ 1.91
CSNK1E-206ENST00000413574 RPL27P61353 136 aaKnown RBP26.99■■□□□ 1.91
CSNK1E-206ENST00000413574 TSC22D1Q15714 1073 aa26.99■■□□□ 1.91
CSNK1E-206ENST00000413574 CLEC12AQ5QGZ9 265 aa26.99■■□□□ 1.91
CSNK1E-206ENST00000413574 FAHD1Q6P587 224 aa26.99■■□□□ 1.91
CSNK1E-206ENST00000413574 CD300LDQ6UXZ3 194 aa26.99■■□□□ 1.91
CSNK1E-206ENST00000413574 Q6ZT83 130 aa26.99■■□□□ 1.91
CSNK1E-206ENST00000413574 SVOPLQ8N434 492 aa26.99■■□□□ 1.91
CSNK1E-206ENST00000413574 OR8D4Q8NGM9 314 aa26.99■■□□□ 1.91
CSNK1E-206ENST00000413574 RNASE6Q93091 150 aaKnown RBP26.99■■□□□ 1.91
CSNK1E-206ENST00000413574 ALKBH3Q96Q83 286 aaPredicted RBP26.99■■□□□ 1.91
CSNK1E-206ENST00000413574 NRIP3Q9NQ35 241 aa26.99■■□□□ 1.91
CSNK1E-206ENST00000413574 KIF17Q9P2E2 1029 aa26.99■■□□□ 1.91
CSNK1E-206ENST00000413574 UPB1Q9UBR1 384 aa26.99■■□□□ 1.91
CSNK1E-206ENST00000413574 REV1Q9UBZ9 1251 aa26.99■■□□□ 1.91
CSNK1E-206ENST00000413574 ICE1Q9Y2F5 2266 aa26.99■■□□□ 1.91
CSNK1E-206ENST00000413574 RRP9O43818 475 aaKnown RBP26.98■■□□□ 1.91
CSNK1E-206ENST00000413574 PPP1R3DO95685 299 aa26.98■■□□□ 1.91
CSNK1E-206ENST00000413574 IGHMP01871 453 aa26.98■■□□□ 1.91
CSNK1E-206ENST00000413574 RCN1Q15293 331 aa26.98■■□□□ 1.91
CSNK1E-206ENST00000413574 TAF11Q15544 211 aa26.98■■□□□ 1.91
CSNK1E-206ENST00000413574 FAM122BQ7Z309 247 aa26.98■■□□□ 1.91
CSNK1E-206ENST00000413574 CXorf67Q86X51 503 aaPredicted RBP26.98■■□□□ 1.91
CSNK1E-206ENST00000413574 Q96M85 177 aa26.98■■□□□ 1.91
CSNK1E-206ENST00000413574 ADAD1Q96M93 576 aaKnown RBP26.98■■□□□ 1.91
CSNK1E-206ENST00000413574 GPX7Q96SL4 187 aaPredicted RBP26.98■■□□□ 1.91
CSNK1E-206ENST00000413574 ZNF556Q9HAH1 456 aa26.98■■□□□ 1.91
CSNK1E-206ENST00000413574 IL20Q9NYY1 176 aa26.98■■□□□ 1.91
CSNK1E-206ENST00000413574 MALT1Q9UDY8 824 aa26.98■■□□□ 1.91
CSNK1E-206ENST00000413574 IER3IP1Q9Y5U9 82 aa26.98■■□□□ 1.91
CSNK1E-206ENST00000413574 C9orf135Q5VTT2 229 aa26.98■■□□□ 1.91
CSNK1E-206ENST00000413574 DPY19L2P2Q6ZN68 376 aa26.98■■□□□ 1.91
CSNK1E-206ENST00000413574 SLC25A44Q96H78 314 aaPredicted RBP26.98■■□□□ 1.91
CSNK1E-206ENST00000413574 ASB6Q9NWX5 421 aa26.98■■□□□ 1.91
CSNK1E-206ENST00000413574 FOXD3Q9UJU5 478 aaPredicted RBP26.98■■□□□ 1.91
CSNK1E-206ENST00000413574 NPIPB13A6NJU9 1138 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 NPIPB4C9JG80 1138 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 PRSS44E7EML9 344 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 M0R3G1 203 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 KRT33AO76009 404 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 IGHV1-2P23083 117 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 SLC6A6P31641 620 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 ACVR1BP36896 505 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 CD79BP40259 229 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 COX10Q12887 443 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 SLC36A3Q495N2 470 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 C20orf196Q8IYI0 205 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 CLDN22Q8N7P3 220 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 POMGNT2Q8NAT1 580 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 SYT14Q8NB59 555 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 ZNF519Q8TB69 540 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 HDAC2Q92769 488 aaKnown RBP26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 ZNF566Q969W8 418 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 RASD2Q96D21 266 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 CIB1Q99828 191 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 IFT27Q9BW83 186 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 NDEL1Q9GZM8 345 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 GABARAPL1Q9H0R8 117 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 GRHPRQ9UBQ7 328 aa26.97■■□□□ 1.91
CSNK1E-206ENST00000413574 TRMUO75648 421 aaKnown RBP26.96■■□□□ 1.91
CSNK1E-206ENST00000413574 PGA4P0DJD7 388 aa26.96■■□□□ 1.91
CSNK1E-206ENST00000413574 PGA3P0DJD8 388 aa26.96■■□□□ 1.91
CSNK1E-206ENST00000413574 STAC2Q6ZMT1 411 aa26.96■■□□□ 1.91
CSNK1E-206ENST00000413574 OR6N1Q8NGY5 312 aa26.96■■□□□ 1.91
CSNK1E-206ENST00000413574 ELOVL5Q9NYP7 299 aa26.96■■□□□ 1.91
CSNK1E-206ENST00000413574 TEX13CA0A0J9YWL9 993 aa26.95■■□□□ 1.91
CSNK1E-206ENST00000413574 MITFO75030 526 aaPredicted RBP26.95■■□□□ 1.91
CSNK1E-206ENST00000413574 LYZL6O75951 148 aa26.95■■□□□ 1.91
CSNK1E-206ENST00000413574 ACADSP16219 412 aa26.95■■□□□ 1.91
CSNK1E-206ENST00000413574 GPR137CQ8N3F9 429 aa26.95■■□□□ 1.91
CSNK1E-206ENST00000413574 ARIH2OSQ8N7S6 290 aa26.95■■□□□ 1.91
CSNK1E-206ENST00000413574 ZNF837Q96EG3 531 aaPredicted RBP26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms