RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 LRMDAQ9H2I8 198 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 C1orf198Q9H425 327 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 PRDM13Q9H4Q3 707 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 GSTO2Q9H4Y5 243 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 ACSS3Q9H6R3 686 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 MARCH7Q9H992 704 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 NANOGQ9H9S0 305 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 PATZ1Q9HBE1 687 aaKnown RBP2□□□□□ -2.09
RNU4-53P-201ENST00000410828 CDH20Q9HBT6 801 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 GPR35Q9HC97 309 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 B3GAT2Q9NPZ5 323 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 TNFRSF19Q9NS68 423 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 CYSLTR2Q9NS75 346 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC6A13Q9NSD5 602 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 NECAP2Q9NVZ3 263 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 TMEM216Q9P0N5 145 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 EGFL7Q9UHF1 273 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 IL20RAQ9UHF4 553 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF180Q9UJW8 692 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 POFUT2Q9Y2G5 429 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 GPR45Q9Y5Y3 372 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 NPTNQ9Y639 398 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 SOX21Q9Y651 276 aaPredicted RBP2□□□□□ -2.09
RNU4-53P-201ENST00000410828 CACNG2Q9Y698 323 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 POMT1Q9Y6A1 747 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 SAR1BQ9Y6B6 198 aa2□□□□□ -2.09
RNU4-53P-201ENST00000410828 DOCK11Q5JSL3 2073 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 RNF103-CHMP3A0A140T963 221 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 KIR2DS1A0A191URI9 304 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 LOC102725191A0A1B0GVB3 256 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 IQCMA0A1B0GVH7 501 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 MDFIC2A0A1B0GVS7 189 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 PRAMEF27A3QJZ7 478 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF726A6NNF4 738 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 POC1B-GALNT4F8VUJ3 575 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 AIM2O14862 343 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 AZIN1O14977 448 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 LSM1O15116 133 aaKnown RBP1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 TM9SF1O15321 606 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 GPR37O15354 613 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 DHHO43323 396 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 RAD51CO43502 376 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 FRS3O43559 492 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR2T1O43869 369 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 XPNPEP2O43895 674 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 GPR137BO60478 399 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 NPHS1O60500 1241 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 NPIPB7O75200 414 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 FARS2O95363 451 aaKnown RBP1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 TGDSO95455 350 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 SNAP29O95721 258 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 PTHP01270 115 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 IGHV1-46P01743 117 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 IGHV3-13P01766 116 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 IGHV2-70P01814 119 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 DBIP07108 87 aaKnown RBP1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 ADH4P08319 380 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 MELTFP08582 738 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 WNT2P09544 360 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 LINC00032P0C843 101 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR8G3PP0DMU2 310 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR12D1P0DN82 309 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 MYL2P10916 166 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 PNMTP11086 282 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 B4GALT1P15291 398 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF250P15622 560 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 IL7RP16871 459 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 TNFRSF1AP19438 455 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 NCF2P19878 526 aaPredicted RBP1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 PRPS1L1P21108 318 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 FUT4P22083 530 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 ARRB2P32121 409 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 RPS5P46782 204 aaKnown RBP1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 ANXA11P50995 505 aaKnown RBP1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 MMP15P51511 669 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 AQP5P55064 265 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 UCP2P55851 309 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 DNAJB13P59910 316 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 ERVS71-1P61550 626 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 SEC61A1P61619 476 aaKnown RBP1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 GNG11P61952 73 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 BTG1P62324 171 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 HBA1P69905 142 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 PLAURQ03405 335 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 GLO1Q04760 184 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 PLP2Q04941 152 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 BST1Q10588 318 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 BNIP2Q12982 314 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 PMS2P3Q13401 168 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 DOC2BQ14184 412 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 MFSD13AQ14CX5 517 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 LARS2Q15031 903 aaKnown RBP1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 CHI3L2Q15782 390 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 TSTQ16762 297 aaKnown RBP1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 TBC1D28Q2M2D7 210 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 GALNTL6Q49A17 601 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 GPAT3Q53EU6 434 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZMAT1Q5H9K5 638 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 PHYHD1Q5SRE7 291 aa1.99□□□□□ -2.09
RNU4-53P-201ENST00000410828 FAM69AQ5T7M9 428 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms