RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 ENTPD5O75356 428 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 KRT36O76013 467 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 DIRAS1O95057 198 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 IGHG1P01857 330 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 F13BP05160 661 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 TSPAN19P0C672 248 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 HOXB1P14653 301 aaPredicted RBP9.58□□□□□ -0.88
CHMP3-205ENST00000409810 CDH2P19022 906 aaPredicted RBP9.58□□□□□ -0.88
CHMP3-205ENST00000409810 RRM2P31350 389 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 AQP2P41181 271 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 GPR4P46093 362 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 KRTAP10-9P60411 292 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 PRPS1P60891 318 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 UBE2NP61088 152 aaKnown RBP9.58□□□□□ -0.88
CHMP3-205ENST00000409810 MELKQ14680 651 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 CEACAM16Q2WEN9 425 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 ANKRD16Q6P6B7 361 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 PODNL1Q6PEZ8 512 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 C22orf34Q6ZV56 151 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 PIWIL3Q7Z3Z3 882 aaKnown RBP9.58□□□□□ -0.88
CHMP3-205ENST00000409810 TSEN54Q7Z6J9 526 aaKnown RBP9.58□□□□□ -0.88
CHMP3-205ENST00000409810 CDH24Q86UP0 819 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 AQP12AQ8IXF9 295 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 OR1K1Q8NGR3 316 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 OR52N5Q8NH56 324 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 OR52J3Q8NH60 311 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 NINJ1Q92982 152 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 SLC7A6OSQ96CW6 309 aaPredicted RBP9.58□□□□□ -0.88
CHMP3-205ENST00000409810 SLC25A44Q96H78 314 aaPredicted RBP9.58□□□□□ -0.88
CHMP3-205ENST00000409810 BOD1Q96IK1 185 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 CLPTM1LQ96KA5 538 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 ULBP2Q9BZM5 246 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 CRLF2Q9HC73 371 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 GPR35Q9HC97 309 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 SLC17A5Q9NRA2 495 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 TMCC3Q9ULS5 477 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 MAST4O15021 2626 aa9.58□□□□□ -0.88
CHMP3-205ENST00000409810 TACC2O95359 2948 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 TRBV4-1A0A0J9YWV2 114 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 TCRBV5S2A0A599 114 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 ZNF99A8MXY4 864 aaPredicted RBP9.57□□□□□ -0.88
CHMP3-205ENST00000409810 SIAH2O43255 324 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 CD3EP07766 207 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 MAKP20794 623 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 MAGEA2P43356 314 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 FOXG1P55316 489 aaPredicted RBP9.57□□□□□ -0.88
CHMP3-205ENST00000409810 CLRN1P58418 232 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 RPS4XP62701 263 aaKnown RBP9.57□□□□□ -0.88
CHMP3-205ENST00000409810 MS4A2Q01362 244 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 LGALS3BPQ08380 585 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 FLOT2Q14254 428 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 TBRG1Q3YBR2 411 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 IQCCQ4KMZ1 466 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 NCMAPQ5T1S8 102 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 FAM205BPQ63HN1 556 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 TBPL2Q6SJ96 375 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 TMEM108Q6UXF1 575 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 PAMR1Q6UXH9 720 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 NHLRC1Q6VVB1 395 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 TMPRSS11FQ6ZWK6 438 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 CCDC36Q8IYA8 594 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 NOXO1Q8NFA2 376 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 OR4K5Q8NGD3 323 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 MAGEE2Q8TD90 523 aaPredicted RBP9.57□□□□□ -0.88
CHMP3-205ENST00000409810 ASB10Q8WXI3 467 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 NANOS1Q8WY41 292 aaKnown RBP9.57□□□□□ -0.88
CHMP3-205ENST00000409810 FAM46AQ96IP4 442 aaKnown RBP9.57□□□□□ -0.88
CHMP3-205ENST00000409810 TXNDC15Q96J42 360 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 MMADHCQ9H3L0 296 aaPredicted RBP9.57□□□□□ -0.88
CHMP3-205ENST00000409810 TXNIPQ9H3M7 391 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 MGAT4BQ9UQ53 548 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 POFUT2Q9Y2G5 429 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 SLC25A15Q9Y619 301 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 PLCE1Q9P212 2302 aa9.57□□□□□ -0.88
CHMP3-205ENST00000409810 RAI1Q7Z5J4 1906 aaPredicted RBP9.56□□□□□ -0.88
CHMP3-205ENST00000409810 CSMD2Q7Z408 3487 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 HRNRQ86YZ3 2850 aaPredicted RBP9.56□□□□□ -0.88
CHMP3-205ENST00000409810 TRAV27A0A087WT01 109 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 ARPC4-TTLL3A0A0A6YYG9 625 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 SH3PXD2BA1X283 911 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 A6NIZ1 184 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 ACOT8O14734 319 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 OR10H3O60404 316 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 IGHMP01871 453 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 RAP2AP10114 183 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 ACADSP16219 412 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 FUT4P22083 530 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 DNASE1P24855 282 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 PTAFRP25105 342 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 RPL4P36578 427 aaKnown RBP9.56□□□□□ -0.88
CHMP3-205ENST00000409810 OMPP47874 163 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 CTXN1P60606 82 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 RAP1BP61224 184 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 RAP1AP62834 184 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 LSM11P83369 360 aaKnown RBP eCLIP9.56□□□□□ -0.88
CHMP3-205ENST00000409810 TOP3AQ13472 1001 aaPredicted RBP9.56□□□□□ -0.88
CHMP3-205ENST00000409810 GK3PQ14409 553 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 ACKR1Q16570 336 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 ZBED5Q49AG3 693 aa9.56□□□□□ -0.88
CHMP3-205ENST00000409810 HIKESHIQ53FT3 197 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms