RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 PAGE3Q5JUK9 113 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 CPEB3Q8NE35 698 aaKnown RBP7.77□□□□□ -1.17
SCN9A-203ENST00000409672 SPIN2AQ99865 258 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 SPIN2BQ9BPZ2 258 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 CACNG6Q9BXT2 260 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 FN3KRPQ9HA64 309 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 PCYT1BQ9Y5K3 369 aaPredicted RBP7.77□□□□□ -1.17
SCN9A-203ENST00000409672 MED6O75586 246 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 FDXRP22570 491 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 SELENOWP63302 87 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 FCRLAQ7L513 359 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 P4HTMQ9NXG6 502 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 SNX11Q9Y5W9 270 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 A0A0B4J2A0 478 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 IGHEP01854 428 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 AKAIN1P0CW23 69 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 M6PRP20645 277 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 PLAURQ03405 335 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 ARL6IP1Q15041 203 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 SYT9Q86SS6 491 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 ISCA2Q86U28 154 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 NPEPL1Q8NDH3 523 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 PFN4Q8NHR9 129 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 TMEM230Q96A57 120 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 BARHL1Q9BZE3 327 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 EBF1Q9UH73 591 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 SHPKQ9UHJ6 478 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 ZNF623O75123 536 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 SDC1P18827 310 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 RAC1P63000 192 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 EBPQ15125 230 aaKnown RBP7.77□□□□□ -1.17
SCN9A-203ENST00000409672 CNIH2Q6PI25 160 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 TBPL2Q6SJ96 375 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 GLCCI1Q86VQ1 547 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 PLPP7Q8NBV4 271 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 SPPL3Q8TCT6 385 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 EMC7Q9NPA0 242 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 SLC23A1Q9UHI7 598 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 ZNF785A8K8V0 405 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 GPR75O95800 540 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 OPN1MWP04001 364 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 OPN1MW2P0DN77 364 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 OPN1MW3P0DN78 364 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 TNFRSF17Q02223 184 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 MFAP5Q13361 173 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 MSMO1Q15800 293 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 CCL17Q92583 94 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 TLCD1Q96CP7 247 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 NMNAT3Q96T66 252 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 C20orf24Q9BUV8 137 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 VAPAQ9P0L0 249 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 CHATP28329 748 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 HTR1EP28566 365 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 NKAIN1Q4KMZ8 207 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 LPCAT3Q6P1A2 487 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 VRK3Q8IV63 474 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 FAM71CQ8NEG0 241 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 OR2Z1Q8NG97 314 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 LRRC15Q8TF66 581 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 SLC38A5Q8WUX1 472 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 AIG1Q9NVV5 245 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 CLCF1Q9UBD9 225 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 SLIT3O75094 1523 aa7.77□□□□□ -1.17
SCN9A-203ENST00000409672 PHIPQ8WWQ0 1821 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 POM121BA6NF01 834 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 SHISA8B8ZZ34 492 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 ZNF205O95201 554 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 ITGAMP11215 1152 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 ADPRHP54922 357 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 HBA1P69905 142 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 APOOLQ6UXV4 268 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 DCXRQ7Z4W1 244 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 ZNF595Q8IYB9 648 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 NECAP1Q8NC96 275 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 OR52D1Q9H346 318 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 B3GAT1Q9P2W7 334 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 PURGQ9UJV8 347 aaKnown RBP7.76□□□□□ -1.17
SCN9A-203ENST00000409672 V9GY05 133 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 BRWD1Q9NSI6 2320 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 A0A1B0GX78 115 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 PIGAP37287 484 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 HTR2BP41595 481 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 ASCL1P50553 236 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 CAMK2BQ13554 666 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 ACKR1Q16570 336 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 YIF1BQ5BJH7 314 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 SSX7Q7RTT5 188 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 H2BFWTQ7Z2G1 175 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 COMMD7Q86VX2 200 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 CHDHQ8NE62 594 aaPredicted RBP7.76□□□□□ -1.17
SCN9A-203ENST00000409672 TMIEQ8NEW7 156 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 FAM213BQ8TBF2 198 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 MUL1Q969V5 352 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 LGALS12Q96DT0 336 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 LCORQ96JN0 433 aaPredicted RBP7.76□□□□□ -1.17
SCN9A-203ENST00000409672 TRIB3Q96RU7 358 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 PAQR5Q9NXK6 330 aaPredicted RBP7.76□□□□□ -1.17
SCN9A-203ENST00000409672 OR5K3A6NET4 321 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 OR2J2O76002 312 aa7.76□□□□□ -1.17
SCN9A-203ENST00000409672 SBK2P0C263 348 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms