RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 LY9Q9HBG7 655 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 PLA2R1Q13018 1463 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 RPAP1Q9BWH6 1393 aaPredicted RBP2.12□□□□□ -2.07
PMS1-203ENST00000409593 KIF16BQ96L93 1317 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 A0A1B0GWJ7 208 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 MBLAC1A4D2B0 266 aaPredicted RBP2.12□□□□□ -2.07
PMS1-203ENST00000409593 ZNF705GA8MUZ8 300 aaPredicted RBP2.12□□□□□ -2.07
PMS1-203ENST00000409593 TBX19O60806 448 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 RAMP3O60896 148 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 DCNP07585 359 aaKnown RBP2.12□□□□□ -2.07
PMS1-203ENST00000409593 TCN2P20062 427 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 SLC2A5P22732 501 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 CCR1P32246 355 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 RORAP35398 523 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 NCBP2P52298 156 aaKnown RBP eCLIP2.12□□□□□ -2.07
PMS1-203ENST00000409593 SLC7A9P82251 487 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 AQP6Q13520 282 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 COX19Q49B96 90 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 LINC00173Q6ZV60 143 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 UTS2BQ765I0 119 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 UBALD2Q8IYN6 164 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 ZNF461Q8TAF7 563 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 OR10C1Q96KK4 312 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 PACSIN2Q9UNF0 486 aaPredicted RBP2.12□□□□□ -2.07
PMS1-203ENST00000409593 WIF1Q9Y5W5 379 aa2.12□□□□□ -2.07
PMS1-203ENST00000409593 IGLV3-22A0A075B6J6 115 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 SRP72O76094 671 aaKnown RBP2.11□□□□□ -2.07
PMS1-203ENST00000409593 RCBTB2O95199 551 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 SMIM10L1P0DMW3 83 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 TCN1P20061 433 aaPredicted RBP2.11□□□□□ -2.07
PMS1-203ENST00000409593 SOX6P35712 828 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 CYB561P49447 251 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 SUB1P53999 127 aaKnown RBP eCLIP2.11□□□□□ -2.07
PMS1-203ENST00000409593 CACNG7P62955 275 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 KLHL38Q2WGJ6 581 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 NADK2Q4G0N4 442 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 VAX1Q5SQQ9 334 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 NCCRP1Q6ZVX7 275 aaPredicted RBP2.11□□□□□ -2.07
PMS1-203ENST00000409593 TRIM69Q86WT6 500 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 MREGQ8N565 214 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 PYROXD1Q8WU10 500 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 SGK3Q96BR1 496 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 SMIM10Q96HG1 83 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 TSSK3Q96PN8 268 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 UGT1A7Q9HAW7 530 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 UGT1A10Q9HAW8 530 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 UGT1A8Q9HAW9 530 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 MCCC2Q9HCC0 563 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 ADAP2Q9NPF8 381 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 SLC35D1Q9NTN3 355 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 EXD2Q9NVH0 621 aa2.11□□□□□ -2.07
PMS1-203ENST00000409593 MARCOQ9UEW3 520 aaPredicted RBP2.11□□□□□ -2.07
PMS1-203ENST00000409593 PRKAB2O43741 272 aa2.1□□□□□ -2.07
PMS1-203ENST00000409593 GAPDHP04406 335 aaKnown RBP2.1□□□□□ -2.07
PMS1-203ENST00000409593 CRYBB1P53674 252 aaPredicted RBP2.1□□□□□ -2.07
PMS1-203ENST00000409593 POLR2FP61218 127 aaKnown RBP2.1□□□□□ -2.07
PMS1-203ENST00000409593 PRSS8Q16651 343 aa2.1□□□□□ -2.07
PMS1-203ENST00000409593 KRTAP13-2Q52LG2 175 aa2.1□□□□□ -2.07
PMS1-203ENST00000409593 HES5Q5TA89 166 aa2.1□□□□□ -2.07
PMS1-203ENST00000409593 STRADAQ7RTN6 431 aa2.1□□□□□ -2.07
PMS1-203ENST00000409593 NEGR1Q7Z3B1 354 aa2.1□□□□□ -2.07
PMS1-203ENST00000409593 NUDCD3Q8IVD9 361 aa2.1□□□□□ -2.07
PMS1-203ENST00000409593 PIANPQ8IYJ0 282 aa2.1□□□□□ -2.07
PMS1-203ENST00000409593 FAM133AQ8N9E0 248 aa2.1□□□□□ -2.07
PMS1-203ENST00000409593 OR10G4Q8NGN3 311 aa2.1□□□□□ -2.07
PMS1-203ENST00000409593 OR52P1PQ8NH57 321 aa2.1□□□□□ -2.07
PMS1-203ENST00000409593 TTC25Q96NG3 672 aa2.1□□□□□ -2.07
PMS1-203ENST00000409593 SLC38A2Q96QD8 506 aa2.1□□□□□ -2.07
PMS1-203ENST00000409593 RIBC2Q9H4K1 309 aa2.1□□□□□ -2.07
PMS1-203ENST00000409593 YY1AP1Q9H869 796 aa2.1□□□□□ -2.07
PMS1-203ENST00000409593 ZNF355PQ9NSJ1 428 aa2.1□□□□□ -2.07
PMS1-203ENST00000409593 HPF1Q9NWY4 346 aa2.1□□□□□ -2.07
PMS1-203ENST00000409593 GGA2Q9UJY4 613 aa2.1□□□□□ -2.07
PMS1-203ENST00000409593 K7EPI3 171 aa2.09□□□□□ -2.07
PMS1-203ENST00000409593 ARPC3O15145 178 aa2.09□□□□□ -2.07
PMS1-203ENST00000409593 KMOO15229 486 aa2.09□□□□□ -2.07
PMS1-203ENST00000409593 B3GALNT1O75752 331 aa2.09□□□□□ -2.07
PMS1-203ENST00000409593 SCGNO76038 276 aa2.09□□□□□ -2.07
PMS1-203ENST00000409593 CELP19835 753 aa2.09□□□□□ -2.07
PMS1-203ENST00000409593 CD86P42081 329 aa2.09□□□□□ -2.07
PMS1-203ENST00000409593 GPR6P46095 362 aaPredicted RBP2.09□□□□□ -2.07
PMS1-203ENST00000409593 SCRN3Q0VDG4 424 aa2.09□□□□□ -2.07
PMS1-203ENST00000409593 ERCC8Q13216 396 aa2.09□□□□□ -2.07
PMS1-203ENST00000409593 XKR4Q5GH76 650 aa2.09□□□□□ -2.07
PMS1-203ENST00000409593 RIMKLAQ8IXN7 391 aa2.09□□□□□ -2.07
PMS1-203ENST00000409593 C15orf56Q8N910 161 aa2.09□□□□□ -2.07
PMS1-203ENST00000409593 MFSD9Q8NBP5 474 aa2.09□□□□□ -2.07
PMS1-203ENST00000409593 THRSPQ92748 146 aa2.09□□□□□ -2.07
PMS1-203ENST00000409593 RBMXL1Q96E39 390 aaKnown RBP2.09□□□□□ -2.07
PMS1-203ENST00000409593 MED8Q96G25 268 aa2.09□□□□□ -2.07
PMS1-203ENST00000409593 ULBP2Q9BZM5 246 aa2.09□□□□□ -2.07
PMS1-203ENST00000409593 RPP21Q9H633 154 aaKnown RBP2.09□□□□□ -2.07
PMS1-203ENST00000409593 A0A1B0GVI7 797 aa2.09□□□□□ -2.08
PMS1-203ENST00000409593 A0A1B0GVX0 72 aa2.09□□□□□ -2.08
PMS1-203ENST00000409593 RBFOX2O43251 390 aaKnown RBP eCLIP2.09□□□□□ -2.08
PMS1-203ENST00000409593 SMPD2O60906 423 aa2.09□□□□□ -2.08
PMS1-203ENST00000409593 KRT8P05787 483 aa2.09□□□□□ -2.08
PMS1-203ENST00000409593 CCR8P51685 355 aa2.09□□□□□ -2.08
PMS1-203ENST00000409593 BPIFB3P59826 476 aa2.09□□□□□ -2.08
PMS1-203ENST00000409593 RPS21P63220 83 aaKnown RBP2.09□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms