RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 KTI12Q96EK9 354 aaPredicted RBP12.21□□□□□ -0.45
COL6A2-204ENST00000409416 RANBP3Q9H6Z4 567 aaPredicted RBP12.21□□□□□ -0.45
COL6A2-204ENST00000409416 WDR76Q9H967 626 aa12.21□□□□□ -0.45
COL6A2-204ENST00000409416 SLC22A13Q9Y226 551 aa12.21□□□□□ -0.45
COL6A2-204ENST00000409416 TGFBR3LH3BV60 316 aa12.21□□□□□ -0.46
COL6A2-204ENST00000409416 HPXP02790 462 aa12.21□□□□□ -0.46
COL6A2-204ENST00000409416 CLDN6P56747 220 aa12.21□□□□□ -0.46
COL6A2-204ENST00000409416 HTR4Q13639 388 aa12.21□□□□□ -0.46
COL6A2-204ENST00000409416 INPP5JQ15735 1006 aaPredicted RBP12.21□□□□□ -0.46
COL6A2-204ENST00000409416 SLC6A19Q695T7 634 aa12.21□□□□□ -0.46
COL6A2-204ENST00000409416 PLPP7Q8NBV4 271 aa12.21□□□□□ -0.46
COL6A2-204ENST00000409416 CUL9Q8IWT3 2517 aa12.21□□□□□ -0.46
COL6A2-204ENST00000409416 OR6C68A6NDL8 312 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 H0YC42 278 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 ICOSLGO75144 302 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 SERPINA3P01011 423 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 THBS1P07996 1170 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 BTCP35070 178 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 ACTC1P68032 377 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 ACTA1P68133 377 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 LGALS3BPQ08380 585 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 ZNF613Q6PF04 617 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 APOOLQ6UXV4 268 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 TPRA1Q86W33 373 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 BCORP1Q8N888 145 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 OR52I2Q8NH67 350 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 KCTD12Q96CX2 325 aaKnown RBP12.2□□□□□ -0.46
COL6A2-204ENST00000409416 PGLYRP3Q96LB9 341 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 MCCC2Q9HCC0 563 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.2□□□□□ -0.46
COL6A2-204ENST00000409416 MGAT4CQ9UBM8 478 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 COPS3Q9UNS2 423 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 FER1L5A0AVI2 2057 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 ZNF593O00488 134 aaPredicted RBP12.2□□□□□ -0.46
COL6A2-204ENST00000409416 UBL3O95164 117 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 ALDOBP05062 364 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 IGHV4-34P06331 123 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 ACSM1Q08AH1 577 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 PRICKLE4Q2TBC4 344 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 SLC36A2Q495M3 483 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.2□□□□□ -0.46
COL6A2-204ENST00000409416 RNF113BQ8IZP6 322 aaKnown RBP12.2□□□□□ -0.46
COL6A2-204ENST00000409416 DDOQ99489 341 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 COPS7AQ9UBW8 275 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 PRODH2Q9UF12 536 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 ZNF407Q9C0G0 2248 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 TEX51A0A1B0GUA7 166 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 DCTN6O00399 190 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 TNFRSF4P43489 277 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 BTG1P62324 171 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 SPOCK1Q08629 439 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 ELOCQ15369 112 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 RAB30Q15771 203 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 TOR2AQ5JU69 321 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 TMEM69Q5SWH9 247 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 KIAA0895LQ68EN5 471 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 RPL13AP3Q6NVV1 102 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 COMMD7Q86VX2 200 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 SLC39A7Q92504 469 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 ALG12Q9BV10 488 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 C1QTNF6Q9BXI9 259 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 C20orf85Q9H1P6 137 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 MED29Q9NX70 200 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 MED11Q9P086 117 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 PILRAQ9UKJ1 303 aa12.2□□□□□ -0.46
COL6A2-204ENST00000409416 PRR14LQ5THK1 2151 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 A0A0G2JK05 382 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 SPTY2D1-AS1A0A0U1RR47 76 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 GPR171O14626 319 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 SLC22A5O76082 557 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 LCN1P31025 176 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 TSFMP43897 325 aaKnown RBP12.19□□□□□ -0.46
COL6A2-204ENST00000409416 SELENOPP49908 381 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 PER3P56645 1201 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 CDK5R1Q15078 307 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 ZBTB37Q5TC79 503 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 FAM122CQ6P4D5 195 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 KRT77Q7Z794 578 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 BMPERQ8N8U9 685 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 ANKRD9Q96BM1 317 aaPredicted RBP12.19□□□□□ -0.46
COL6A2-204ENST00000409416 LIN7BQ9HAP6 207 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 RXFP3Q9NSD7 469 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 CUTCQ9NTM9 273 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 CALCBP10092 127 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 ANXA7P20073 488 aaKnown RBP12.19□□□□□ -0.46
COL6A2-204ENST00000409416 PTBP1P26599 531 aaKnown RBP eCLIP12.19□□□□□ -0.46
COL6A2-204ENST00000409416 BDH1Q02338 343 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 OR7A5Q15622 319 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 CLVS2Q5SYC1 327 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 LIN54Q6MZP7 749 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 TEX261Q6UWH6 196 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 OR51A4Q8NGJ6 313 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 NCDNQ9UBB6 729 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 CGGBP1Q9UFW8 167 aaPredicted RBP12.19□□□□□ -0.46
COL6A2-204ENST00000409416 U3KQ87 197 aa12.19□□□□□ -0.46
COL6A2-204ENST00000409416 SERINC4A6NH21 518 aa12.18□□□□□ -0.46
COL6A2-204ENST00000409416 LEUTXA8MZ59 168 aa12.18□□□□□ -0.46
COL6A2-204ENST00000409416 ZNF879B4DU55 563 aa12.18□□□□□ -0.46
COL6A2-204ENST00000409416 ZNF749O43361 778 aa12.18□□□□□ -0.46
COL6A2-204ENST00000409416 BRINP1O60477 761 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms