RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 ZNF705GA8MUZ8 300 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-203ENST00000409050 APOA2P02652 100 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 CAPNS1P04632 268 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 CYC1P08574 325 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 ACRP10323 421 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 CHRNEQ04844 493 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 XKR7Q5GH72 579 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 MORN1Q5T089 497 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 MRPL2Q5T653 305 aaKnown RBP5.64□□□□□ -1.51
SCN1A-203ENST00000409050 PIP5KL1Q5T9C9 394 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 FAM71E1Q6IPT2 247 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 HEPHL1Q6MZM0 1159 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 CGB2Q6NT52 195 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 BTNL8Q6UX41 500 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 SSX9Q7RTT3 188 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 NRARPQ7Z6K4 114 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 ENTHD1Q8IYW4 607 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 AGBL5Q8NDL9 886 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 SGIP1Q9BQI5 828 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 RTP3Q9BQQ7 232 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 WDR83Q9BRX9 315 aaKnown RBP5.64□□□□□ -1.51
SCN1A-203ENST00000409050 ZPBPQ9BS86 351 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 BARHL1Q9BZE3 327 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 CHST6Q9GZX3 395 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 HRH4Q9H3N8 390 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 LYRM2Q9NU23 88 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-203ENST00000409050 TRAPPC4Q9Y296 219 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 NSG1A0A0A6YYJ2 146 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 OTOL1A6NHN0 477 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-203ENST00000409050 ZNF891A8MT65 544 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-203ENST00000409050 PRSS44E7EML9 344 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 PPP5D1E7EU14 171 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 SUSD5O60279 629 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 SCGB1D1O95968 90 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 TIMP1P01033 207 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 ADRB1P08588 477 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 FOLR1P15328 257 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 SSR4P51571 173 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 MTCP1P56278 107 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 RPS18P62269 152 aaKnown RBP5.64□□□□□ -1.51
SCN1A-203ENST00000409050 GABREP78334 506 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 SLC22A6Q4U2R8 563 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 RPS26P11Q5JNZ5 115 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-203ENST00000409050 PHYHD1Q5SRE7 291 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 TMUB2Q71RG4 321 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 LSRQ86X29 649 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-203ENST00000409050 ADGRG3Q86Y34 549 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 ST8SIA1Q92185 356 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 GHSRQ92847 366 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 PINX1Q96BK5 328 aaKnown RBP5.64□□□□□ -1.51
SCN1A-203ENST00000409050 BOCQ9BWV1 1114 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 TTTY10Q9BZA0 68 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 SEMA6CQ9H3T2 930 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 TAS2R16Q9NYV7 291 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 NSG2Q9Y328 171 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 A0A087WV62 115 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 ANKRD34BA5PLL1 514 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 ZNF593O00488 134 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-203ENST00000409050 AIFM1O95831 613 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 HPNP05981 417 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 CD79AP11912 226 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 ITGB8P26012 769 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 GRPRP30550 384 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 P2RY2P41231 377 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 CSN1S1P47710 185 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 HOXA1P49639 335 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-203ENST00000409050 DOC2BQ14184 412 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 SLC10A1Q14973 349 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 RPE65Q16518 533 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 SFRP5Q5T4F7 317 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 STEAP3Q658P3 488 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 PLXDC2Q6UX71 529 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 TFAP2EQ6VUC0 442 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 LHFPL2Q6ZUX7 228 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 AAED1Q7RTV5 226 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 KMT5CQ86Y97 462 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 ZNF561Q8N587 486 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 RBMXL3Q8N7X1 1067 aaKnown RBP5.64□□□□□ -1.51
SCN1A-203ENST00000409050 C19orf47Q8N9M1 422 aaKnown RBP5.64□□□□□ -1.51
SCN1A-203ENST00000409050 CMTM2Q8TAZ6 248 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 LGALS14Q8TCE9 139 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 APH1AQ96BI3 265 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 RTL8AQ9BWD3 113 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 TXNRD2Q9NNW7 524 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 DLL4Q9NR61 685 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 SPATA6Q9NWH7 488 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-203ENST00000409050 GAR1Q9NY12 217 aaKnown RBP5.64□□□□□ -1.51
SCN1A-203ENST00000409050 ROBO1Q9Y6N7 1651 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 TRAV1-2A0A0B4J238 106 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 TLCD2A6NGC4 264 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 SMAD9O15198 467 aaKnown RBP5.64□□□□□ -1.51
SCN1A-203ENST00000409050 XRCC2O43543 280 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 HCRTR1O43613 425 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 CDC123O75794 336 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-203ENST00000409050 AQP8O94778 261 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 MGMTP16455 207 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 FUT4P22083 530 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 GABRR1P24046 479 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 HLA-FP30511 346 aa5.64□□□□□ -1.51
SCN1A-203ENST00000409050 BMI1P35226 326 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms