RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 SLC46A1Q96NT5 459 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 NECAP2Q9NVZ3 263 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 ARAP2Q8WZ64 1704 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 TXNL1O43396 289 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 PVRP15151 417 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 ELK1P19419 428 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 BIDP55957 195 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 BAGE3Q86Y29 109 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 BAGE2Q86Y30 109 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 PARP16Q8N5Y8 322 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 KCNG3Q8TAE7 436 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 ITPKCQ96DU7 683 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 RIMS4Q9H426 269 aaPredicted RBP11.17□□□□□ -0.62
SMCR8-201ENST00000406438 MED20Q9H944 212 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 STRCQ7RTU9 1775 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 ZCWPW2A0A1B0GU75 182 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 SOCS6O14544 535 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 ITGB8P26012 769 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 GRB2P62993 217 aaKnown RBP11.17□□□□□ -0.62
SMCR8-201ENST00000406438 EXT1Q16394 746 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 LYPD4Q6UWN0 246 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 OVCH1Q7RTY7 1134 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 FAM117AQ9C073 453 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 WWTR1Q9GZV5 400 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 NRIP3Q9NQ35 241 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 TMEM72A0PK05 275 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 RAD52P43351 418 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 CCL11P51671 97 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 GALEQ14376 348 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 EBPQ15125 230 aaKnown RBP11.17□□□□□ -0.62
SMCR8-201ENST00000406438 MBOAT2Q6ZWT7 520 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 SLC22A24Q8N4F4 322 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 CISD2Q8N5K1 135 aaKnown RBP11.17□□□□□ -0.62
SMCR8-201ENST00000406438 SLC35G3Q8N808 338 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 TFAP2CQ92754 450 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 EMG1Q92979 244 aaKnown RBP11.17□□□□□ -0.62
SMCR8-201ENST00000406438 CPNE4Q96A23 557 aaPredicted RBP11.17□□□□□ -0.62
SMCR8-201ENST00000406438 DRGXA6NNA5 263 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 HSD17B6O14756 317 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 GPRIN2O60269 458 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 SORBS2O94875 1100 aaKnown RBP11.17□□□□□ -0.62
SMCR8-201ENST00000406438 IGFBP1P08833 259 aaPredicted RBP11.17□□□□□ -0.62
SMCR8-201ENST00000406438 HTR6P50406 440 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 RAB35Q15286 201 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 PIANPQ8IYJ0 282 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 SLC30A3Q99726 388 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 TRBV4-1A0A0J9YWV2 114 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 DEGS1O15121 323 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 ADH4P08319 380 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 BMP1P13497 986 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 CSNK1DP48730 415 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 EPHA5P54756 1037 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 SLC5A12Q1EHB4 618 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 NKAIN2Q5VXU1 208 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 LACC1Q8IV20 430 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 DUSP13Q9UII6 198 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 MRPS2Q9Y399 296 aaKnown RBP11.16□□□□□ -0.62
SMCR8-201ENST00000406438 FAM186AA6NE01 2351 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 PLXNB2O15031 1838 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 CHEK1O14757 476 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 PHF1O43189 567 aaPredicted RBP11.16□□□□□ -0.62
SMCR8-201ENST00000406438 ZNF93P35789 620 aaPredicted RBP11.16□□□□□ -0.62
SMCR8-201ENST00000406438 SLC1A3P43003 542 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 EDDM3BP56851 147 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 TSPAN31Q12999 210 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 PAPD4Q6PIY7 484 aaKnown RBP11.16□□□□□ -0.62
SMCR8-201ENST00000406438 SLC35D2Q76EJ3 337 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.16□□□□□ -0.62
SMCR8-201ENST00000406438 POFUT1Q9H488 388 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 HSFX1Q9UBD0 423 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 PIGLQ9Y2B2 252 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 TBPP20226 339 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 ACSM1Q08AH1 577 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 EDAQ92838 391 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 UTP4Q969X6 686 aaKnown RBP11.16□□□□□ -0.62
SMCR8-201ENST00000406438 SLC35A4Q96G79 324 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 ATF6BQ99941 703 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 HAPLN2Q9GZV7 340 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 SLC6A17Q9H1V8 727 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 PSMB5P28074 263 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 PPT1P50897 306 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 MS4A2Q01362 244 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 RPE65Q16518 533 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 SHARPINQ9H0F6 387 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 ARV1Q9H2C2 271 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 TMEM189-UBE2V1I3L0A0 370 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 SLC5A2P31639 672 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 TRHRP34981 398 aaPredicted RBP11.16□□□□□ -0.62
SMCR8-201ENST00000406438 GNB1P62873 340 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 SIAH1Q8IUQ4 282 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.16□□□□□ -0.62
SMCR8-201ENST00000406438 OR10X1Q8NGY0 326 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 SLC38A5Q8WUX1 472 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 MRPL38Q96DV4 380 aaKnown RBP11.16□□□□□ -0.62
SMCR8-201ENST00000406438 LCORQ96JN0 433 aaPredicted RBP11.16□□□□□ -0.62
SMCR8-201ENST00000406438 DCLRE1CQ96SD1 692 aaKnown RBP11.16□□□□□ -0.62
SMCR8-201ENST00000406438 SLCO5A1Q9H2Y9 848 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 COL11A1P12107 1806 aaPredicted RBP11.16□□□□□ -0.62
SMCR8-201ENST00000406438 J3KTA2 159 aa11.16□□□□□ -0.62
SMCR8-201ENST00000406438 EIF2DP41214 584 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms