RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 ADH1CP00326 375 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 CD74P04233 296 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 CD80P33681 288 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 PMELP40967 661 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 MAPK8P45983 427 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 TMEM115Q12893 351 aaPredicted RBP13.76□□□□□ -0.21
CYLD-202ENST00000398568 YOD1Q5VVQ6 348 aaPredicted RBP13.76□□□□□ -0.21
CYLD-202ENST00000398568 GDF7Q7Z4P5 450 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 OR5T3Q8NGG3 340 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 OR2G2Q8NGZ5 317 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 CA5BP1Q8WTZ4 195 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 NUDCD2Q8WVJ2 157 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 NECAB3Q96P71 396 aaPredicted RBP13.76□□□□□ -0.21
CYLD-202ENST00000398568 RIOK2Q9BVS4 552 aaKnown RBP13.76□□□□□ -0.21
CYLD-202ENST00000398568 HELZP42694 1942 aaKnown RBP13.76□□□□□ -0.21
CYLD-202ENST00000398568 BRWD1Q9NSI6 2320 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 ZNF106Q9H2Y7 1883 aaKnown RBP13.76□□□□□ -0.21
CYLD-202ENST00000398568 A0A087X0M5 115 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 A0A1B0GX30 115 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 CXorf65A6NEN9 183 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 AGPAT2O15120 278 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 GPRIN2O60269 458 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 SLCO2B1O94956 709 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 RCBTB2O95199 551 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 EOMESO95936 686 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 CD3DP04234 171 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 GYPBP06028 91 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 PGAM2P15259 253 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 CTNNB1P35222 781 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 PSMB10P40306 273 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 LTBQ06643 244 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 TGIF1Q15583 401 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 RGCCQ9H4X1 137 aa13.76□□□□□ -0.21
CYLD-202ENST00000398568 GPR55Q9Y2T6 319 aaPredicted RBP13.76□□□□□ -0.21
CYLD-202ENST00000398568 YIF1AO95070 293 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 IFNA2P01563 188 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 IFNA10P01566 189 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 CLUP10909 449 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 SLC11A1P49279 550 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 FOXK2Q01167 660 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 HMGN3Q15651 99 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 PRRT3Q5FWE3 981 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 TCEAL6Q6IPX3 200 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 SLC30A7Q8NEW0 376 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 TM4SF18Q96CE8 201 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 ELF4Q99607 663 aaPredicted RBP13.75□□□□□ -0.21
CYLD-202ENST00000398568 SELENOIQ9C0D9 397 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 CMC2Q9NRP2 79 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 A0A0A6YYC8 382 aaPredicted RBP13.75□□□□□ -0.21
CYLD-202ENST00000398568 I3L1I5 382 aaPredicted RBP13.75□□□□□ -0.21
CYLD-202ENST00000398568 XRCC3O43542 346 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 SOCS5O75159 536 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 TMIGD3P0DMS9 266 aaPredicted RBP13.75□□□□□ -0.21
CYLD-202ENST00000398568 ACKR3P25106 362 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 POU3F4P49335 361 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 RPS11P62280 158 aaKnown RBP eCLIP13.75□□□□□ -0.21
CYLD-202ENST00000398568 TGM3Q08188 693 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 KIAA0141Q14154 515 aaPredicted RBP13.75□□□□□ -0.21
CYLD-202ENST00000398568 ZNF239Q16600 458 aaKnown RBP13.75□□□□□ -0.21
CYLD-202ENST00000398568 NXPE4Q6UWF7 544 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 TMPRSS12Q86WS5 348 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 CDK20Q8IZL9 346 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 ZNF740Q8NDX6 193 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 OR4K17Q8NGC6 315 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 OR1J2Q8NGS2 313 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 MAFIPQ8WZ33 124 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 DCUN1D4Q92564 292 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 AKR1E2Q96JD6 320 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 ARHGDIGQ99819 225 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 SLC25A21Q9BQT8 299 aaPredicted RBP13.75□□□□□ -0.21
CYLD-202ENST00000398568 C1orf198Q9H425 327 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 NCDNQ9UBB6 729 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 FBXO4Q9UKT5 387 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 CA14Q9ULX7 337 aa13.75□□□□□ -0.21
CYLD-202ENST00000398568 MAN2B1O00754 1011 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 TBL1XO60907 577 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 RAB3DO95716 219 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 RPN2P04844 631 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 ZGLP1P0C6A0 271 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 NPPBP16860 134 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 DDTP30046 118 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 PRSS3P35030 304 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 LBHQ53QV2 105 aaPredicted RBP13.74□□□□□ -0.21
CYLD-202ENST00000398568 SLC2A12Q8TD20 617 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 FOXRED1Q96CU9 486 aaPredicted RBP13.74□□□□□ -0.21
CYLD-202ENST00000398568 GFI1Q99684 422 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 FN3KRPQ9HA64 309 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 ZDHHC4Q9NPG8 344 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 LPAR3Q9UBY5 353 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 SLC35A3Q9Y2D2 325 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 TRAV18A0A075B6X5 111 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 A0A1B0GTI1 187 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 MFNGO00587 321 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 KLF4O43474 513 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 HLA-AP01891 365 aaKnown RBP13.74□□□□□ -0.21
CYLD-202ENST00000398568 MAOAP21397 527 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 NME2P22392 152 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 GUCA2AQ02747 115 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 CCINQ13939 588 aa13.74□□□□□ -0.21
CYLD-202ENST00000398568 CTXN3Q4LDR2 81 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms