RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 SPATA4Q8NEY3 305 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 OR1N2Q8NGR9 330 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 RNF138Q8WVD3 245 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 ELMO1Q92556 727 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 DCUN1D4Q92564 292 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 NDRG1Q92597 394 aaKnown RBP1.82□□□□□ -2.12
CD47-203ENST00000398258 OR2M2Q96R28 347 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 TGS1Q96RS0 853 aaKnown RBP1.82□□□□□ -2.12
CD47-203ENST00000398258 RASL11BQ9BPW5 248 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 NUP58Q9BVL2 599 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 HES7Q9BYE0 225 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 MRPL47Q9HD33 250 aaKnown RBP1.82□□□□□ -2.12
CD47-203ENST00000398258 ADAP2Q9NPF8 381 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 PSMC3IPQ9P2W1 217 aaPredicted RBP1.82□□□□□ -2.12
CD47-203ENST00000398258 PRO0461Q9UI25 63 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 MMP17Q9ULZ9 603 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 TP53TG5Q9Y2B4 290 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 SLC25A15Q9Y619 301 aa1.82□□□□□ -2.12
CD47-203ENST00000398258 PHF3Q92576 2039 aaKnown RBP1.82□□□□□ -2.12
CD47-203ENST00000398258 RLFQ13129 1914 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 CHD4Q14839 1912 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 TRAV39A0A0B4J263 110 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 IGKV1D-13A0A0B4J2D9 117 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 KIR2DL5BA0A0G2JN68 375 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 KIR2DL5BA0A0G2JPC4 375 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 TRBV11-1A0A0K0K1C0 115 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 CTAGE15A4D2H0 777 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 PINLYPA6NC86 204 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 RBMY1BA6NDE4 496 aaKnown RBP1.81□□□□□ -2.12
CD47-203ENST00000398258 RBMY1EA6NEQ0 496 aaKnown RBP1.81□□□□□ -2.12
CD47-203ENST00000398258 GJE1A6NN92 205 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 ZNF726A6NNF4 738 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 PSTPIP1O43586 416 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 ERLIN1O75477 346 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 SERPIND1P05546 499 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 RBMY1DP0C7P1 496 aaKnown RBP1.81□□□□□ -2.12
CD47-203ENST00000398258 PABPC4LP0CB38 370 aaKnown RBP1.81□□□□□ -2.12
CD47-203ENST00000398258 RBMY1A1P0DJD3 496 aaKnown RBP1.81□□□□□ -2.12
CD47-203ENST00000398258 IGHV3-43DP0DP04 118 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 IGKV1-13P0DP09 117 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 TROVE2P10155 538 aaKnown RBP eCLIP1.81□□□□□ -2.12
CD47-203ENST00000398258 NR2C1P13056 603 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 RCC1P18754 421 aaPredicted RBP1.81□□□□□ -2.12
CD47-203ENST00000398258 RORAP35398 523 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 DRD3P35462 400 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 NUDT1P36639 197 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 PDIA2Q13087 525 aaKnown RBP1.81□□□□□ -2.12
CD47-203ENST00000398258 MPPED2Q15777 294 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 VPS26BQ4G0F5 336 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 RAET1LQ5VY80 246 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 FRMPD2BQ6IN97 320 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 SASS6Q6UVJ0 657 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 CTAGE6Q86UF2 777 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 TMEM61Q8N0U2 210 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 TTC5Q8N0Z6 440 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 KIR2DL5AQ8N109 375 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 BBS5Q8N3I7 341 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 FAM71E2Q8N5Q1 922 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 MS4A15Q8N5U1 240 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 B3GNT7Q8NFL0 401 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 OR4F15Q8NGB8 312 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 OR2G3Q8NGZ4 309 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 OR6X1Q8NH79 312 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 KIR2DL5BQ8NHK3 375 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 BLOC1S5Q8TDH9 187 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 ACMSDQ8TDX5 336 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 STMN2Q93045 179 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 SH3GL3Q99963 347 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 NAT9Q9BTE0 207 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 TMEM59Q9BXS4 323 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 ROGDIQ9GZN7 287 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 NEUROG2Q9H2A3 272 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 CWH43Q9H720 699 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 NANOGQ9H9S0 305 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 SIAEQ9HAT2 523 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 INPP5EQ9NRR6 644 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 RPS6KB2Q9UBS0 482 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 NUP50Q9UKX7 468 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 PACSIN2Q9UNF0 486 aaPredicted RBP1.81□□□□□ -2.12
CD47-203ENST00000398258 AKNAQ7Z591 1439 aa1.81□□□□□ -2.12
CD47-203ENST00000398258 LTBP1Q14766 1721 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 NKX2-6A6NCS4 301 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 TCP11X1B4DZS4 312 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 H0Y9J4 135 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 DNALI1O14645 258 aaPredicted RBP1.8□□□□□ -2.12
CD47-203ENST00000398258 GOSR2O14653 212 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 WBP4O75554 376 aaKnown RBP1.8□□□□□ -2.12
CD47-203ENST00000398258 CTAG2O75638 210 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 EIF3GO75821 320 aaKnown RBP eCLIP1.8□□□□□ -2.12
CD47-203ENST00000398258 OR2F2O95006 317 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 MOSP00540 346 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 INSP01308 110 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 GKN3PP0CG01 181 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 SMIM10L1P0DMW3 83 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 SFTPCP11686 197 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 HPGDP15428 266 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 ABOP16442 354 aa1.8□□□□□ -2.12
CD47-203ENST00000398258 MDKP21741 143 aaPredicted RBP1.8□□□□□ -2.12
CD47-203ENST00000398258 HNRNPH3P31942 346 aaKnown RBP1.8□□□□□ -2.12
CD47-203ENST00000398258 FOXN2P32314 431 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms