RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 C1orf94Q6P1W5 598 aa22.45■■□□□ 1.18
U2AF1-203ENST00000398137 AMIGO2Q86SJ2 522 aa22.45■■□□□ 1.18
U2AF1-203ENST00000398137 HS3ST5Q8IZT8 346 aa22.45■■□□□ 1.18
U2AF1-203ENST00000398137 GNPDA2Q8TDQ7 276 aa22.45■■□□□ 1.18
U2AF1-203ENST00000398137 GIPC3Q8TF64 312 aa22.45■■□□□ 1.18
U2AF1-203ENST00000398137 DACH2Q96NX9 599 aa22.45■■□□□ 1.18
U2AF1-203ENST00000398137 FOXC2Q99958 501 aa22.45■■□□□ 1.18
U2AF1-203ENST00000398137 FANCFQ9NPI8 374 aa22.45■■□□□ 1.18
U2AF1-203ENST00000398137 INIPQ9NRY2 104 aa22.45■■□□□ 1.18
U2AF1-203ENST00000398137 PRSS50Q9UI38 385 aa22.45■■□□□ 1.18
U2AF1-203ENST00000398137 ITPR3Q14573 2671 aa22.45■■□□□ 1.18
U2AF1-203ENST00000398137 IGHV3-9P01782 118 aa22.44■■□□□ 1.18
U2AF1-203ENST00000398137 HRGP04196 525 aa22.44■■□□□ 1.18
U2AF1-203ENST00000398137 POU2F1P14859 743 aa22.44■■□□□ 1.18
U2AF1-203ENST00000398137 IFNGR1P15260 489 aa22.44■■□□□ 1.18
U2AF1-203ENST00000398137 CCKARP32238 428 aa22.44■■□□□ 1.18
U2AF1-203ENST00000398137 GSSP48637 474 aa22.44■■□□□ 1.18
U2AF1-203ENST00000398137 SELENOPP49908 381 aa22.44■■□□□ 1.18
U2AF1-203ENST00000398137 ZBED5Q49AG3 693 aa22.44■■□□□ 1.18
U2AF1-203ENST00000398137 ALG10Q5BKT4 473 aa22.44■■□□□ 1.18
U2AF1-203ENST00000398137 NIPAL3Q6P499 406 aa22.44■■□□□ 1.18
U2AF1-203ENST00000398137 NHLRC1Q6VVB1 395 aa22.44■■□□□ 1.18
U2AF1-203ENST00000398137 STK32CQ86UX6 486 aa22.44■■□□□ 1.18
U2AF1-203ENST00000398137 IGFN1Q86VF2 1251 aa22.44■■□□□ 1.18
U2AF1-203ENST00000398137 TXNDC15Q96J42 360 aa22.44■■□□□ 1.18
U2AF1-203ENST00000398137 PARPBPQ9NWS1 579 aa22.44■■□□□ 1.18
U2AF1-203ENST00000398137 PDP1Q9P0J1 537 aaPredicted RBP22.44■■□□□ 1.18
U2AF1-203ENST00000398137 RCE1Q9Y256 329 aa22.44■■□□□ 1.18
U2AF1-203ENST00000398137 SH3D21A4FU49 640 aa22.43■■□□□ 1.18
U2AF1-203ENST00000398137 AKAP8O43823 692 aaKnown RBP22.43■■□□□ 1.18
U2AF1-203ENST00000398137 GASTP01350 101 aa22.43■■□□□ 1.18
U2AF1-203ENST00000398137 ZNF26P17031 533 aaPredicted RBP22.43■■□□□ 1.18
U2AF1-203ENST00000398137 MELKQ14680 651 aa22.43■■□□□ 1.18
U2AF1-203ENST00000398137 ANKDD1AQ495B1 522 aa22.43■■□□□ 1.18
U2AF1-203ENST00000398137 HMBOX1Q6NT76 420 aa22.43■■□□□ 1.18
U2AF1-203ENST00000398137 SLC35D2Q76EJ3 337 aa22.43■■□□□ 1.18
U2AF1-203ENST00000398137 WDFY1Q8IWB7 410 aa22.43■■□□□ 1.18
U2AF1-203ENST00000398137 C10orf67Q8IYJ2 551 aa22.43■■□□□ 1.18
U2AF1-203ENST00000398137 FANK1Q8TC84 345 aa22.43■■□□□ 1.18
U2AF1-203ENST00000398137 GTPBP3Q969Y2 492 aaKnown RBP22.43■■□□□ 1.18
U2AF1-203ENST00000398137 EMC6Q9BV81 110 aa22.43■■□□□ 1.18
U2AF1-203ENST00000398137 SIGLEC7Q9Y286 467 aa22.43■■□□□ 1.18
U2AF1-203ENST00000398137 A0A1W2PRG6 482 aa22.42■■□□□ 1.18
U2AF1-203ENST00000398137 SIAH2O43255 324 aa22.42■■□□□ 1.18
U2AF1-203ENST00000398137 TSPAN31Q12999 210 aa22.42■■□□□ 1.18
U2AF1-203ENST00000398137 TOP3AQ13472 1001 aaPredicted RBP22.42■■□□□ 1.18
U2AF1-203ENST00000398137 PAMR1Q6UXH9 720 aa22.42■■□□□ 1.18
U2AF1-203ENST00000398137 UBE2J2Q8N2K1 259 aa22.42■■□□□ 1.18
U2AF1-203ENST00000398137 LRRC75AQ8NAA5 344 aa22.42■■□□□ 1.18
U2AF1-203ENST00000398137 OR2M2Q96R28 347 aa22.42■■□□□ 1.18
U2AF1-203ENST00000398137 SEMA6AQ9H2E6 1030 aa22.42■■□□□ 1.18
U2AF1-203ENST00000398137 SLCO5A1Q9H2Y9 848 aa22.42■■□□□ 1.18
U2AF1-203ENST00000398137 S100A14Q9HCY8 104 aa22.42■■□□□ 1.18
U2AF1-203ENST00000398137 MAGED1Q9Y5V3 778 aaPredicted RBP22.42■■□□□ 1.18
U2AF1-203ENST00000398137 ARRDC5A6NEK1 342 aa22.41■■□□□ 1.18
U2AF1-203ENST00000398137 MCIDASD6RGH6 385 aa22.41■■□□□ 1.18
U2AF1-203ENST00000398137 PTP4A3O75365 173 aa22.41■■□□□ 1.18
U2AF1-203ENST00000398137 ZNF432O94892 652 aa22.41■■□□□ 1.18
U2AF1-203ENST00000398137 RPL4P36578 427 aaKnown RBP22.41■■□□□ 1.18
U2AF1-203ENST00000398137 PCYT1AP49585 367 aa22.41■■□□□ 1.18
U2AF1-203ENST00000398137 BIDP55957 195 aa22.41■■□□□ 1.18
U2AF1-203ENST00000398137 LGALS3BPQ08380 585 aa22.41■■□□□ 1.18
U2AF1-203ENST00000398137 CARD17Q5XLA6 110 aa22.41■■□□□ 1.18
U2AF1-203ENST00000398137 SHQ1Q6PI26 577 aaKnown RBP22.41■■□□□ 1.18
U2AF1-203ENST00000398137 C22orf34Q6ZV56 151 aa22.41■■□□□ 1.18
U2AF1-203ENST00000398137 STMN2Q93045 179 aa22.41■■□□□ 1.18
U2AF1-203ENST00000398137 FEVQ99581 238 aa22.41■■□□□ 1.18
U2AF1-203ENST00000398137 PKP2Q99959 881 aa22.41■■□□□ 1.18
U2AF1-203ENST00000398137 BDH2Q9BUT1 245 aa22.41■■□□□ 1.18
U2AF1-203ENST00000398137 IL20RAQ9UHF4 553 aa22.41■■□□□ 1.18
U2AF1-203ENST00000398137 MGAT4BQ9UQ53 548 aa22.41■■□□□ 1.18
U2AF1-203ENST00000398137 SLC35F4A4IF30 521 aa22.4■■□□□ 1.18
U2AF1-203ENST00000398137 NDUFB2O95178 105 aa22.4■■□□□ 1.18
U2AF1-203ENST00000398137 PRKACGP22612 351 aa22.4■■□□□ 1.18
U2AF1-203ENST00000398137 FXYD6P3P58550 94 aa22.4■■□□□ 1.18
U2AF1-203ENST00000398137 CTXN1P60606 82 aa22.4■■□□□ 1.18
U2AF1-203ENST00000398137 PRPS1P60891 318 aa22.4■■□□□ 1.18
U2AF1-203ENST00000398137 ACKR1Q16570 336 aa22.4■■□□□ 1.18
U2AF1-203ENST00000398137 TSPO2Q5TGU0 170 aa22.4■■□□□ 1.18
U2AF1-203ENST00000398137 THSD4Q6ZMP0 1018 aa22.4■■□□□ 1.18
U2AF1-203ENST00000398137 TMEM123Q8N131 208 aa22.4■■□□□ 1.18
U2AF1-203ENST00000398137 OR5K1Q8NHB7 308 aa22.4■■□□□ 1.18
U2AF1-203ENST00000398137 WFIKKN1Q96NZ8 548 aa22.4■■□□□ 1.18
U2AF1-203ENST00000398137 DGCR6LQ9BY27 220 aa22.4■■□□□ 1.18
U2AF1-203ENST00000398137 NDEL1Q9GZM8 345 aa22.4■■□□□ 1.18
U2AF1-203ENST00000398137 SLC7A10Q9NS82 523 aa22.4■■□□□ 1.18
U2AF1-203ENST00000398137 FREM1Q5H8C1 2179 aa22.4■■□□□ 1.18
U2AF1-203ENST00000398137 SLC43A1O75387 559 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 GOSR1O95249 250 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 ATE1O95260 518 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 BCL10O95999 233 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 ADAP00813 363 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 ZNF23P17027 643 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 CD79BP40259 229 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 DAP3P51398 398 aaKnown RBP22.39■■□□□ 1.17
U2AF1-203ENST00000398137 ARHGDIAP52565 204 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 CAMK2DQ13557 499 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 FBXW9Q5XUX1 488 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 SMARCD3Q6STE5 483 aa22.39■■□□□ 1.17
U2AF1-203ENST00000398137 ZNF620Q6ZNG0 422 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms