RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 ITGADQ13349 1161 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 CRMP1Q14194 572 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 SLC17A1Q14916 467 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 ARMC4Q5T2S8 1044 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 SLC35D2Q76EJ3 337 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 BCDIN3DQ7Z5W3 292 aaKnown RBP15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 GPAT4Q86UL3 456 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 UEVLDQ8IX04 471 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 ZNF786Q8N393 782 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 ARIH2OSQ8N7S6 290 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 SLC37A3Q8NCC5 494 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 NPEPL1Q8NDH3 523 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 OR52E2Q8NGJ4 325 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 SSC4DQ8WTU2 575 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 ASB10Q8WXI3 467 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 ROBO4Q8WZ75 1007 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 ZNF566Q969W8 418 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 SARAFQ96BY9 339 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 LRR1Q96L50 414 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 DNAJC27Q9NZQ0 273 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 KLHL13Q9P2N7 655 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 CAMK2AQ9UQM7 478 aa15.09■□□□□ 0.01
TSPAN4-205ENST00000397406 ESPL1Q14674 2120 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 ALPK2Q86TB3 2170 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 HIVEP3Q5T1R4 2406 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 SPTAN1Q13813 2472 aaKnown RBP15.08■□□□□ 0
TSPAN4-205ENST00000397406 FAM183AA6NL82 134 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 SLC1A7O00341 560 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 CYTIPO60759 359 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 ENTPD6O75354 484 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 ZNF3P17036 446 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 ACVR1BP36896 505 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 CDKN2AP42771 156 aaKnown RBP15.08■□□□□ 0
TSPAN4-205ENST00000397406 DAP3P51398 398 aaKnown RBP15.08■□□□□ 0
TSPAN4-205ENST00000397406 CXCR4P61073 352 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 MELKQ14680 651 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 AADACL4Q5VUY2 407 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 MEDAGQ5VYS4 303 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 FGD2Q7Z6J4 655 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 CPOQ8IVL8 374 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 WDFY1Q8IWB7 410 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 CYB561A3Q8NBI2 242 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 PTP4A1Q93096 173 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 TXNDC15Q96J42 360 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 TUBA1CQ9BQE3 449 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 SF3B5Q9BWJ5 86 aaKnown RBP15.08■□□□□ 0
TSPAN4-205ENST00000397406 HCAR1Q9BXC0 346 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 CLN6Q9NWW5 311 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 MED29Q9NX70 200 aa15.08■□□□□ 0
TSPAN4-205ENST00000397406 RP1L1Q8IWN7 2480 aaPredicted RBP15.07■□□□□ 0
TSPAN4-205ENST00000397406 SH3D21A4FU49 640 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 OR14I1A6ND48 311 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 ZNF716A6NP11 495 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 ZNHIT1O43257 154 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 CLDN1O95832 211 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 BCL10O95999 233 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 ZNF43P17038 809 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 TDGF1P3P51864 188 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 PON3Q15166 354 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 KRTCAP3Q53RY4 240 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 RBM48Q5RL73 367 aaKnown RBP15.07■□□□□ 0
TSPAN4-205ENST00000397406 PLBD1Q6P4A8 553 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 CREB3L2Q70SY1 520 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 FCRLAQ7L513 359 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 CXXC5Q7LFL8 322 aaKnown RBP15.07■□□□□ 0
TSPAN4-205ENST00000397406 ADGRE4PQ86SQ3 457 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 PM20D2Q8IYS1 436 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 GHDCQ8N2G8 530 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 BBS1Q8NFJ9 593 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 OR9K2Q8NGE7 335 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 ZPLD1Q8TCW7 415 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 RNF128Q8TEB7 428 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 FAR1Q8WVX9 515 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 Q96MT0 163 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 ZNF582Q96NG8 517 aaPredicted RBP15.07■□□□□ 0
TSPAN4-205ENST00000397406 NMNAT3Q96T66 252 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 SLX1AQ9BQ83 275 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 YTHDF1Q9BYJ9 559 aaKnown RBP15.07■□□□□ 0
TSPAN4-205ENST00000397406 NMNAT2Q9BZQ4 307 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 MED20Q9H944 212 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 PLCXD1Q9NUJ7 323 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 MYRFQ9Y2G1 1151 aa15.07■□□□□ 0
TSPAN4-205ENST00000397406 ICE1Q9Y2F5 2266 aa15.06■□□□□ 0
TSPAN4-205ENST00000397406 OR6C68A6NDL8 312 aa15.06■□□□□ 0
TSPAN4-205ENST00000397406 PRR23D1E9PI22 279 aaPredicted RBP15.06■□□□□ 0
TSPAN4-205ENST00000397406 NPIPA2E9PIF3 369 aa15.06■□□□□ 0
TSPAN4-205ENST00000397406 NPIPA3F8WFD2 350 aa15.06■□□□□ 0
TSPAN4-205ENST00000397406 ARHGEF9O43307 516 aa15.06■□□□□ 0
TSPAN4-205ENST00000397406 XPNPEP2O43895 674 aa15.06■□□□□ 0
TSPAN4-205ENST00000397406 SMNDC1O75940 238 aaKnown RBP eCLIP15.06■□□□□ 03e-7■■□□□ 12.7
TSPAN4-205ENST00000397406 SYNGR4O95473 234 aa15.06■□□□□ 0
TSPAN4-205ENST00000397406 LYNP07948 512 aa15.06■□□□□ 0
TSPAN4-205ENST00000397406 RPSAP08865 295 aaKnown RBP15.06■□□□□ 0
TSPAN4-205ENST00000397406 CCDC159P0C7I6 412 aa15.06■□□□□ 0
TSPAN4-205ENST00000397406 PRR23D2P0DMB1 279 aaPredicted RBP15.06■□□□□ 0
TSPAN4-205ENST00000397406 CRHBPP24387 322 aa15.06■□□□□ 0
TSPAN4-205ENST00000397406 NUDT6P53370 316 aa15.06■□□□□ 0
TSPAN4-205ENST00000397406 SLC16A1P53985 500 aa15.06■□□□□ 0
TSPAN4-205ENST00000397406 RUNX1T1Q06455 604 aa15.06■□□□□ 0
TSPAN4-205ENST00000397406 C1DQ13901 141 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms