RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 CSNK1G2P78368 415 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 HOXC5Q00444 222 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 TNK1Q13470 666 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ALKBH1Q13686 389 aaKnown RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 CLEC14AQ86T13 490 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 OR2L13Q8N349 312 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 OR2T11Q8NH01 316 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 NRG4Q8WWG1 115 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 MOB1AQ9H8S9 216 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 A0A0U1RQK1 487 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 LOC100289279A0A1B0GTE1 492 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ARHGAP33O14559 1287 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 TAPBPO15533 448 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 CLN5O75503 358 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 LGI1O95970 557 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 NKX2-5P52952 324 aaPredicted RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 OR52W1Q6IF63 320 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 VHLLQ6RSH7 139 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 MVB12AQ96EY5 273 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 NUDT22Q9BRQ3 303 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 SGPP1Q9BX95 441 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 SELENOIQ9C0D9 397 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 KCNIP2Q9NS61 270 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 SERTAD4Q9NUC0 356 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 SLC23A2Q9UGH3 650 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 SEC16AO15027 2179 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 OR6C65A6NJZ3 312 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 GLCEO94923 617 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 MSL3P1P0C860 447 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 GPX2P18283 190 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 BIDP55957 195 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ACSM1Q08AH1 577 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ARHGAP11BQ3KRB8 267 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ZMAT1Q5H9K5 638 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 DND1Q8IYX4 353 aaKnown RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 UHRF2Q96PU4 802 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 NECAP2Q9NVZ3 263 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 TXNL4BQ9NX01 149 aaKnown RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 COL11A1P12107 1806 aaPredicted RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 NXPH2O95156 264 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 NAGAP17050 411 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 PTBP1P26599 531 aaKnown RBP eCLIP5.04□□□□□ -1.63e-10■■■■■ 45.4
VPS13C-204ENST00000395898 MAT1AQ00266 395 aaKnown RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 IKZF1Q13422 519 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 KDM4DQ6B0I6 523 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 PAPD4Q6PIY7 484 aaKnown RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 TMEM64Q6YI46 380 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 MEX3DQ86XN8 651 aaKnown RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 TMEM130Q8N3G9 435 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 PGBD5Q8N414 524 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 OR4A16Q8NH70 328 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ABHD4Q8TB40 342 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ISL2Q96A47 359 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 PPA2Q9H2U2 334 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 A0A1W2PQ09 198 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 KRBOX1C9JBD0 128 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 EIF4E2O60573 245 aaKnown RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 HOXA1P49639 335 aaPredicted RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 SNRPGP62308 76 aaKnown RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 THEM4Q5T1C6 240 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 PRAMEF20Q5VT98 475 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 AADACL3Q5VUY0 350 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ABHD17CQ6PCB6 329 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 SLC46A3Q7Z3Q1 461 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 PRSS35Q8N3Z0 413 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 RNF141Q8WVD5 230 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 NUDT9Q9BW91 350 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 CHST8Q9H2A9 424 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ISYNA1Q9NPH2 558 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ASIC5Q9NY37 505 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 CHRNA9Q9UGM1 479 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 RCE1Q9Y256 329 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 CRYZL1O95825 349 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 PSMB1P20618 241 aaKnown RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 CD27P26842 260 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 KIAA1024LP59773 190 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 PAN3Q58A45 887 aaKnown RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 FAM74A1Q5RGS3 127 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 RNLSQ5VYX0 342 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 LAX1Q8IWV1 398 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 TERB2Q8NHR7 220 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 FCRL1Q96LA6 429 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ASB16Q96NS5 453 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ARPC5LQ9BPX5 153 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 HRASLSQ9HDD0 168 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 SNX11Q9Y5W9 270 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 PLPP1O14494 284 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 CHRM2P08172 466 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 NID1P14543 1247 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 SELEP16581 610 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 TEAD1P28347 426 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 BLVRBP30043 206 aaPredicted RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 PTCRAQ6ISU1 281 aaPredicted RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 LACC1Q8IV20 430 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ENTHD1Q8IYW4 607 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 ZADH2Q8N4Q0 377 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 LMNTD1Q8N9Z9 388 aa5.04□□□□□ -1.6
VPS13C-204ENST00000395898 GOT1L1Q8NHS2 421 aaPredicted RBP5.04□□□□□ -1.6
VPS13C-204ENST00000395898 NOX4Q9NPH5 578 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms