RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 SSU72Q9NP77 194 aaKnown RBP18.11■□□□□ 0.49
TRAF4-203ENST00000394925 ZNF224Q9NZL3 707 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 KLHL14Q9P2G3 628 aa18.11■□□□□ 0.49
TRAF4-203ENST00000394925 A0A087WUJ7 227 aa18.1■□□□□ 0.49
TRAF4-203ENST00000394925 A0A1W2PPW3 197 aa18.1■□□□□ 0.49
TRAF4-203ENST00000394925 TRIM77I1YAP6 450 aa18.1■□□□□ 0.49
TRAF4-203ENST00000394925 PNPP00491 289 aa18.1■□□□□ 0.49
TRAF4-203ENST00000394925 EPHA1P21709 976 aa18.1■□□□□ 0.49
TRAF4-203ENST00000394925 HTR2AP28223 471 aa18.1■□□□□ 0.49
TRAF4-203ENST00000394925 HILS1P60008 231 aa18.1■□□□□ 0.49
TRAF4-203ENST00000394925 CAMK2DQ13557 499 aa18.1■□□□□ 0.49
TRAF4-203ENST00000394925 PDCD4Q53EL6 469 aaKnown RBP18.1■□□□□ 0.49
TRAF4-203ENST00000394925 ALG10BQ5I7T1 473 aa18.1■□□□□ 0.49
TRAF4-203ENST00000394925 C6orf10Q5SRN2 563 aa18.1■□□□□ 0.49
TRAF4-203ENST00000394925 ZNF627Q7L945 461 aa18.1■□□□□ 0.49
TRAF4-203ENST00000394925 WDFY1Q8IWB7 410 aa18.1■□□□□ 0.49
TRAF4-203ENST00000394925 LSMEM1Q8N8F7 131 aa18.1■□□□□ 0.49
TRAF4-203ENST00000394925 OR6N1Q8NGY5 312 aa18.1■□□□□ 0.49
TRAF4-203ENST00000394925 ZNF416Q9BWM5 594 aa18.1■□□□□ 0.49
TRAF4-203ENST00000394925 RSPO3Q9BXY4 272 aaPredicted RBP18.1■□□□□ 0.49
TRAF4-203ENST00000394925 ULBP2Q9BZM5 246 aa18.1■□□□□ 0.49
TRAF4-203ENST00000394925 RMND5AQ9H871 391 aa18.1■□□□□ 0.49
TRAF4-203ENST00000394925 BCL2L10Q9HD36 194 aa18.1■□□□□ 0.49
TRAF4-203ENST00000394925 KCNK9Q9NPC2 374 aa18.1■□□□□ 0.49
TRAF4-203ENST00000394925 LOC105371242A0A075B767 164 aa18.09■□□□□ 0.49
TRAF4-203ENST00000394925 TRAV20A0A0B4J274 112 aa18.09■□□□□ 0.49
TRAF4-203ENST00000394925 HDAC3O15379 428 aa18.09■□□□□ 0.49
TRAF4-203ENST00000394925 KITP10721 976 aa18.09■□□□□ 0.49
TRAF4-203ENST00000394925 IDO1P14902 403 aa18.09■□□□□ 0.49
TRAF4-203ENST00000394925 MRPS11P82912 194 aaKnown RBP18.09■□□□□ 0.49
TRAF4-203ENST00000394925 MYBPC1Q00872 1141 aa18.09■□□□□ 0.49
TRAF4-203ENST00000394925 RAB39AQ14964 217 aa18.09■□□□□ 0.49
TRAF4-203ENST00000394925 RGNQ15493 299 aa18.09■□□□□ 0.49
TRAF4-203ENST00000394925 GLIPR1L2Q4G1C9 344 aa18.09■□□□□ 0.49
TRAF4-203ENST00000394925 C1orf229Q6ZS94 237 aaPredicted RBP18.09■□□□□ 0.49
TRAF4-203ENST00000394925 BBS10Q8TAM1 723 aa18.09■□□□□ 0.49
TRAF4-203ENST00000394925 DNAJA4Q8WW22 397 aaPredicted RBP18.09■□□□□ 0.49
TRAF4-203ENST00000394925 SLC41A3Q96GZ6 507 aa18.09■□□□□ 0.49
TRAF4-203ENST00000394925 FOXB1Q99853 325 aa18.09■□□□□ 0.49
TRAF4-203ENST00000394925 DENND2DQ9H6A0 471 aaPredicted RBP18.09■□□□□ 0.49
TRAF4-203ENST00000394925 A4GALTQ9NPC4 353 aa18.09■□□□□ 0.49
TRAF4-203ENST00000394925 TRPC5OSA6NMA1 111 aa18.08■□□□□ 0.48
TRAF4-203ENST00000394925 ZNF726A6NNF4 738 aa18.08■□□□□ 0.48
TRAF4-203ENST00000394925 C5orf58C9J3I9 102 aa18.08■□□□□ 0.48
TRAF4-203ENST00000394925 RP2O75695 350 aa18.08■□□□□ 0.48
TRAF4-203ENST00000394925 UBL3O95164 117 aa18.08■□□□□ 0.48
TRAF4-203ENST00000394925 AVPP01185 164 aa18.08■□□□□ 0.48
TRAF4-203ENST00000394925 PATE4P0C8F1 98 aa18.08■□□□□ 0.48
TRAF4-203ENST00000394925 LSP1P33241 339 aa18.08■□□□□ 0.48
TRAF4-203ENST00000394925 MAGEB1P43366 347 aa18.08■□□□□ 0.48
TRAF4-203ENST00000394925 USP43Q70EL4 1123 aa18.08■□□□□ 0.48
TRAF4-203ENST00000394925 COMTD1Q86VU5 262 aa18.08■□□□□ 0.48
TRAF4-203ENST00000394925 SNX32Q86XE0 403 aa18.08■□□□□ 0.48
TRAF4-203ENST00000394925 RBM4Q9BWF3 364 aaKnown RBP18.08■□□□□ 0.48
TRAF4-203ENST00000394925 ASPNQ9BXN1 380 aa18.08■□□□□ 0.48
TRAF4-203ENST00000394925 ZNF385DQ9H6B1 395 aa18.08■□□□□ 0.48
TRAF4-203ENST00000394925 SLC7A8Q9UHI5 535 aa18.08■□□□□ 0.48
TRAF4-203ENST00000394925 ZNF346Q9UL40 294 aaKnown RBP18.08■□□□□ 0.48
TRAF4-203ENST00000394925 CORINQ9Y5Q5 1042 aa18.08■□□□□ 0.48
TRAF4-203ENST00000394925 KCNAB3O43448 404 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 CDC14BO60729 498 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 SERPINI2O75830 405 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 BGLAPP02818 100 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 PRKAR1BP31321 381 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 PMS2P3Q13401 168 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 NKPD1Q17RQ9 610 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 ACSM5Q6NUN0 579 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 ULK3Q6PHR2 472 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 NHLRC1Q6VVB1 395 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 MSANTD1Q6ZTZ1 278 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 MIER2Q8N344 545 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 OR9I1Q8NGQ6 314 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 FGFBP3Q8TAT2 258 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 ZBTB9Q96C00 473 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 SLC47A1Q96FL8 570 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 JMJD8Q96S16 334 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 CENPHQ9H3R5 247 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 G6PC2Q9NQR9 355 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 SELENONQ9NZV5 590 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 ZIM2Q9NZV7 527 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 TAAR3PQ9P1P4 343 aa18.07■□□□□ 0.48
TRAF4-203ENST00000394925 CLIC1O00299 241 aa18.06■□□□□ 0.48
TRAF4-203ENST00000394925 ANPEPP15144 967 aa18.06■□□□□ 0.48
TRAF4-203ENST00000394925 AHCYP23526 432 aa18.06■□□□□ 0.48
TRAF4-203ENST00000394925 POLR2JP52435 117 aaKnown RBP18.06■□□□□ 0.48
TRAF4-203ENST00000394925 ARFIP2P53365 341 aa18.06■□□□□ 0.48
TRAF4-203ENST00000394925 MVKQ03426 396 aa18.06■□□□□ 0.48
TRAF4-203ENST00000394925 PUDPQ08623 228 aa18.06■□□□□ 0.48
TRAF4-203ENST00000394925 AVPI1Q5T686 147 aa18.06■□□□□ 0.48
TRAF4-203ENST00000394925 RGS7BPQ6MZT1 257 aaPredicted RBP18.06■□□□□ 0.48
TRAF4-203ENST00000394925 ZNF584Q8IVC4 421 aa18.06■□□□□ 0.48
TRAF4-203ENST00000394925 SKA3Q8IX90 412 aa18.06■□□□□ 0.48
TRAF4-203ENST00000394925 TEX29Q8N6K0 151 aa18.06■□□□□ 0.48
TRAF4-203ENST00000394925 C10orf53Q8N6V4 93 aa18.06■□□□□ 0.48
TRAF4-203ENST00000394925 SCAIQ8N9R8 606 aa18.06■□□□□ 0.48
TRAF4-203ENST00000394925 OR6S1Q8NH40 331 aa18.06■□□□□ 0.48
TRAF4-203ENST00000394925 MOGAT1Q96PD6 335 aa18.06■□□□□ 0.48
TRAF4-203ENST00000394925 EPYCQ99645 322 aa18.06■□□□□ 0.48
TRAF4-203ENST00000394925 PAIP1Q9H074 479 aaKnown RBP18.06■□□□□ 0.48
TRAF4-203ENST00000394925 RAD21L1Q9H4I0 556 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms