RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 CD34P28906 385 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 GPR4P46093 362 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 RPL29P47914 159 aaKnown RBP11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 COL9A2Q14055 689 aaPredicted RBP11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 ARTNQ5T4W7 220 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 TBC1D3CQ6IPX1 549 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 REEP3Q6NUK4 255 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 ZNF585AQ6P3V2 769 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 SZRD1Q7Z422 152 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 ANGPTL5Q86XS5 388 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 TBC1D3Q8IZP1 549 aaPredicted RBP11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 TRAM1L1Q8N609 369 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 AMER3Q8N944 861 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 RRNAD1Q96FB5 475 aaKnown RBP11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 S100A16Q96FQ6 103 aaKnown RBP11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 ZNF587Q96SQ5 575 aaPredicted RBP11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 S100A13Q99584 98 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 TEX101Q9BY14 249 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 MED17Q9NVC6 651 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 SEMA5BQ9P283 1151 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 PUS1Q9Y606 427 aaKnown RBP eCLIP11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 HS3ST3B1Q9Y662 390 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 SLCO1B1Q9Y6L6 691 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 UBR3Q6ZT12 1888 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 CHD3Q12873 2000 aaKnown RBP11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 CCDC187A0A096LP49 1063 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 IGKV6-21A0A0C4DH24 114 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 C13orf42A0A1B0GVH6 325 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 ACOT7O00154 380 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 SIAH2O43255 324 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 TGOLN2O43493 480 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 GPR37L1O60883 481 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 CD8AP01732 235 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 FCGR3AP08637 254 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 OR13C7P0DN81 318 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 TYRP1P17643 537 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 GALP22466 123 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 ITPKBP27987 946 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 RAE1P78406 368 aaKnown RBP11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 ZNF177Q13360 481 aaPredicted RBP11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 BTNL3Q6UXE8 466 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 VITQ6UXI7 678 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 FAM151BQ6UXP7 276 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 WDR88Q6ZMY6 472 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 KCTD9Q7L273 389 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 BEND2Q8NDZ0 799 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 ZNF461Q8TAF7 563 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 KLK6Q92876 244 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 NOL4LQ96MY1 436 aaPredicted RBP11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 HIST1H2BLQ99880 126 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 PDCD1LG2Q9BQ51 273 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 OR51V1Q9H2C8 321 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 TCEAL2Q9H3H9 227 aaPredicted RBP11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 TMEM38AQ9H6F2 299 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 UBQLN4Q9NRR5 601 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 ANKRD10Q9NXR5 420 aa11.47□□□□□ -0.57
SLC28A1-203ENST00000394573 CDHR4A6H8M9 788 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 SYNDIG1LA6NDD5 238 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 MSGN1A6NI15 193 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 CCDC85CA6NKD9 419 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 UMAD1C9J7I0 102 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 SURF4O15260 269 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 CD22P20273 847 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 PRSS53Q2L4Q9 553 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 TP53I3Q53FA7 332 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 LCTLQ6UWM7 567 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 SLC35F3Q8IY50 421 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 ZNF615Q8N8J6 731 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 SLC30A7Q8NEW0 376 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 OR4K17Q8NGC6 315 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 OR4K14Q8NGD5 310 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 CASTOR1Q8WTX7 329 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 FAAP24Q9BTP7 215 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 NDC1Q9BTX1 674 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 ACTRT3Q9BYD9 372 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 OR52A5Q9H2C5 316 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 SPHK2Q9NRA0 654 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 PADI1Q9ULC6 663 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 ADAM18Q9Y3Q7 739 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 CSAG2Q9Y5P2 127 aa11.46□□□□□ -0.57
SLC28A1-203ENST00000394573 MED19A0JLT2 244 aaPredicted RBP11.46□□□□□ -0.58
SLC28A1-203ENST00000394573 NUDT19A8MXV4 375 aa11.46□□□□□ -0.58
SLC28A1-203ENST00000394573 C9J4A7 227 aa11.46□□□□□ -0.58
SLC28A1-203ENST00000394573 M0QYG6 137 aa11.46□□□□□ -0.58
SLC28A1-203ENST00000394573 IRAK2O43187 625 aa11.46□□□□□ -0.58
SLC28A1-203ENST00000394573 XRCC3O43542 346 aa11.46□□□□□ -0.58
SLC28A1-203ENST00000394573 MT-ND5P03915 603 aa11.46□□□□□ -0.58
SLC28A1-203ENST00000394573 ANXA5P08758 320 aa11.46□□□□□ -0.58
SLC28A1-203ENST00000394573 SELEP16581 610 aa11.46□□□□□ -0.58
SLC28A1-203ENST00000394573 HTR1FP30939 366 aa11.46□□□□□ -0.58
SLC28A1-203ENST00000394573 GALNSP34059 522 aa11.46□□□□□ -0.58
SLC28A1-203ENST00000394573 NFATC4Q14934 902 aa11.46□□□□□ -0.58
SLC28A1-203ENST00000394573 ZNF697Q5TEC3 545 aa11.46□□□□□ -0.58
SLC28A1-203ENST00000394573 MRM1Q6IN84 353 aaKnown RBP11.46□□□□□ -0.58
SLC28A1-203ENST00000394573 NIPAL3Q6P499 406 aa11.46□□□□□ -0.58
SLC28A1-203ENST00000394573 LINGO4Q6UY18 593 aa11.46□□□□□ -0.58
SLC28A1-203ENST00000394573 FJX1Q86VR8 437 aa11.46□□□□□ -0.58
SLC28A1-203ENST00000394573 METTL27Q8N6F8 245 aaPredicted RBP11.46□□□□□ -0.58
SLC28A1-203ENST00000394573 BHLHE23Q8NDY6 225 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms