RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 C11orf98E9PRG8 122 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 RAB3DO95716 219 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 ACRP10323 421 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 PI3P19957 117 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 PBX2P40425 430 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 PSMD4P55036 377 aaKnown RBP14.94□□□□□ -0.02
PHTF1-205ENST00000393357 RAG2P55895 527 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 ERV3-1Q14264 604 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 TRAM1Q15629 374 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 HACD4Q5VWC8 232 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 RPL22L1Q6P5R6 122 aaKnown RBP14.94□□□□□ -0.02
PHTF1-205ENST00000393357 TMPRSS9Q7Z410 1059 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 FAM220AQ7Z4H9 259 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 KRT77Q7Z794 578 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 RAB42Q8N4Z0 105 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 OR14A16Q8NHC5 309 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 GIMAP5Q96F15 307 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 PURGQ9UJV8 347 aaKnown RBP14.94□□□□□ -0.02
PHTF1-205ENST00000393357 SLC22A13Q9Y226 551 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 TRAV1-2A0A0B4J238 106 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 CPED1A4D0V7 1026 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 DCTN6O00399 190 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 HOXA2O43364 376 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 OR2A4O95047 310 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 LATS1O95835 1130 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 OLFM2O95897 454 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 OR4E1P0C645 316 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 CTAG1AP78358 180 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 FAM53BQ14153 422 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 CLINT1Q14677 625 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 UBXN2BQ14CS0 331 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 STEAP1BQ6NZ63 245 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 DND1Q8IYX4 353 aaKnown RBP14.94□□□□□ -0.02
PHTF1-205ENST00000393357 GTPBP8Q8N3Z3 284 aaPredicted RBP14.94□□□□□ -0.02
PHTF1-205ENST00000393357 JAGN1Q8N5M9 183 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 ACBD4Q8NC06 268 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 OR4K14Q8NGD5 310 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 ROBO4Q8WZ75 1007 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 CMBLQ96DG6 245 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 OR2A7Q96R45 310 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 TRAV14DV4A0A0A6YYC5 116 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 TMEM82A0PJX8 343 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 CLEC3AO75596 197 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 S100A6P06703 90 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 DAOP14920 347 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 ACTC1P68032 377 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 ACTA1P68133 377 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 OR52W1Q6IF63 320 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 GRASPQ7Z6J2 395 aaPredicted RBP14.94□□□□□ -0.02
PHTF1-205ENST00000393357 NRROSQ86YC3 692 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 CMKLR1Q99788 373 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 SELENOIQ9C0D9 397 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 LMAN2LQ9H0V9 348 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 CHRDQ9H2X0 955 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 MRPS2Q9Y399 296 aaKnown RBP14.94□□□□□ -0.02
PHTF1-205ENST00000393357 INSL6Q9Y581 213 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 ANAPC1Q9H1A4 1944 aa14.94□□□□□ -0.02
PHTF1-205ENST00000393357 RAB19A4D1S5 217 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 HOXD10P28358 340 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 CD34P28906 385 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 PRSS3P35030 304 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 MEOX2P50222 304 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 SLC7A9P82251 487 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 CDK3Q00526 305 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 DEFB110Q30KQ9 67 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 ARMC10Q8N2F6 343 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 MOAP1Q96BY2 351 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 HAVCR1Q96D42 359 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 PELI2Q9HAT8 420 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 ZNF223Q9UK11 482 aaPredicted RBP14.93□□□□□ -0.02
PHTF1-205ENST00000393357 ATXN7L1Q9ULK2 861 aaPredicted RBP14.93□□□□□ -0.02
PHTF1-205ENST00000393357 TMEM235A6NFC5 223 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 NDUFS6O75380 124 aaKnown RBP14.93□□□□□ -0.02
PHTF1-205ENST00000393357 SPI1P17947 270 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 ID4P47928 161 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 RAB28P51157 221 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 SMAD2Q15796 467 aaKnown RBP14.93□□□□□ -0.02
PHTF1-205ENST00000393357 FCRL6Q6DN72 434 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 TMPPEQ6ZT21 453 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 SPAG16Q8N0X2 631 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 METTL27Q8N6F8 245 aaPredicted RBP14.93□□□□□ -0.02
PHTF1-205ENST00000393357 ISOC2Q96AB3 205 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 CYYR1Q96J86 154 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 ALG12Q9BV10 488 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 ZNF350Q9GZX5 532 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 WDR76Q9H967 626 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 APMAPQ9HDC9 416 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 STEAP1Q9UHE8 339 aa14.93□□□□□ -0.02
PHTF1-205ENST00000393357 SPTBN5Q9NRC6 3674 aaKnown RBP14.93□□□□□ -0.02
PHTF1-205ENST00000393357 MANSC4A6NHS7 340 aaPredicted RBP14.92□□□□□ -0.02
PHTF1-205ENST00000393357 GSTZ1O43708 216 aaPredicted RBP14.92□□□□□ -0.02
PHTF1-205ENST00000393357 EIF3GO75821 320 aaKnown RBP eCLIP14.92□□□□□ -0.02
PHTF1-205ENST00000393357 ACTL6AO96019 429 aa14.92□□□□□ -0.02
PHTF1-205ENST00000393357 SCRN3Q0VDG4 424 aa14.92□□□□□ -0.02
PHTF1-205ENST00000393357 SNTB1Q13884 538 aaKnown RBP14.92□□□□□ -0.02
PHTF1-205ENST00000393357 CDNFQ49AH0 187 aa14.92□□□□□ -0.02
PHTF1-205ENST00000393357 OVCH1Q7RTY7 1134 aa14.92□□□□□ -0.02
PHTF1-205ENST00000393357 RSPH9Q9H1X1 276 aaPredicted RBP14.92□□□□□ -0.02
PHTF1-205ENST00000393357 DENND4CQ5VZ89 1909 aa14.92□□□□□ -0.02
PHTF1-205ENST00000393357 NAP1L6A6NFF2 107 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms