RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 DDA1Q9BW61 102 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 SYT4Q9H2B2 425 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 NDUFB11Q9NX14 153 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 GRHPRQ9UBQ7 328 aa13.49□□□□□ -0.25
MKS1-202ENST00000393119 SLC22A31A6NKX4 558 aa13.48□□□□□ -0.25
MKS1-202ENST00000393119 FTCDNL1E5RQL4 147 aa13.48□□□□□ -0.25
MKS1-202ENST00000393119 AKR7A3O95154 331 aa13.48□□□□□ -0.25
MKS1-202ENST00000393119 CPEP16870 476 aa13.48□□□□□ -0.25
MKS1-202ENST00000393119 GTF2E2P29084 291 aaKnown RBP13.48□□□□□ -0.25
MKS1-202ENST00000393119 SFTPDP35247 375 aa13.48□□□□□ -0.25
MKS1-202ENST00000393119 MLF1P58340 268 aa13.48□□□□□ -0.25
MKS1-202ENST00000393119 CDK10Q15131 360 aa13.48□□□□□ -0.25
MKS1-202ENST00000393119 ACKR1Q16570 336 aa13.48□□□□□ -0.25
MKS1-202ENST00000393119 LINC01590Q5TEZ4 76 aa13.48□□□□□ -0.25
MKS1-202ENST00000393119 ST6GAL2Q96JF0 529 aa13.48□□□□□ -0.25
MKS1-202ENST00000393119 C4orf36Q96KX1 117 aa13.48□□□□□ -0.25
MKS1-202ENST00000393119 FKRPQ9H9S5 495 aa13.48□□□□□ -0.25
MKS1-202ENST00000393119 ZNF221Q9UK13 617 aa13.48□□□□□ -0.25
MKS1-202ENST00000393119 BAIAP2Q9UQB8 552 aa13.48□□□□□ -0.25
MKS1-202ENST00000393119 PRR33A8MZF0 331 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 ZNF814B7Z6K7 855 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 ARPC3O15145 178 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 SDHAP31040 664 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 DNASE1L1P49184 302 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 SSR4P51571 173 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 KLHL36Q8N4N3 616 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 GPX7Q96SL4 187 aaPredicted RBP13.47□□□□□ -0.25
MKS1-202ENST00000393119 KCNS3Q9BQ31 491 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 NMNAT2Q9BZQ4 307 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 C12orf10Q9HB07 376 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 KLHDC2Q9Y2U9 406 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 SHISA3A0PJX4 238 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 CD8B2A6NJW9 211 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 H0YC42 278 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 MS4A18H0YCH9 400 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 PLPP3O14495 311 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 SSX4O60224 188 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 RAMP1O60894 148 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 FTH1P19P0C7X4 201 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 CD8BP10966 210 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 DDOSTP39656 456 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 RPS15P62841 145 aaKnown RBP13.47□□□□□ -0.25
MKS1-202ENST00000393119 SSPNQ14714 243 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 MS4A18Q3C1V0 323 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 ZNF544Q6NX49 715 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 SPATC1Q76KD6 591 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 JAZF1Q86VZ6 243 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 MISPQ8IVT2 679 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 ESX1Q8N693 406 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 PSD4Q8NDX1 1056 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 PSMF1Q92530 271 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 RNF170Q96K19 258 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 BARHL1Q9BZE3 327 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 NUAK2Q9H093 628 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 TXNL4BQ9NX01 149 aaKnown RBP13.47□□□□□ -0.25
MKS1-202ENST00000393119 MED29Q9NX70 200 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 PCDHGB6Q9Y5F9 930 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 BOD1L1Q8NFC6 3051 aa13.47□□□□□ -0.25
MKS1-202ENST00000393119 AHSA1O95433 338 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 KRT8P05787 483 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 ACVR1BP36896 505 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 ZNF41P51814 821 aaPredicted RBP13.46□□□□□ -0.25
MKS1-202ENST00000393119 CHAF1BQ13112 559 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 GPR50Q13585 617 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 CCDC58Q4VC31 144 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 CRTC2Q53ET0 693 aaPredicted RBP13.46□□□□□ -0.25
MKS1-202ENST00000393119 MAMDC2Q7Z304 686 aaPredicted RBP13.46□□□□□ -0.25
MKS1-202ENST00000393119 CCDC190Q86UF4 302 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 ZNF227Q86WZ6 799 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 EXD3Q8N9H8 876 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 OR13C5Q8NGS8 318 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 TMEM234Q8WY98 164 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 C5orf34Q96MH7 638 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 CCNL2Q96S94 520 aaPredicted RBP13.46□□□□□ -0.25
MKS1-202ENST00000393119 EMC6Q9BV81 110 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 ASPNQ9BXN1 380 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 TSPAN10Q9H1Z9 355 aaPredicted RBP13.46□□□□□ -0.25
MKS1-202ENST00000393119 WDR76Q9H967 626 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 SNTG1Q9NSN8 517 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 CUL9Q8IWT3 2517 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 PSMA1P25786 263 aaKnown RBP13.46□□□□□ -0.25
MKS1-202ENST00000393119 PSMB10P40306 273 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 DIO1P49895 249 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 MADCAM1Q13477 382 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 GALEQ14376 348 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 PON3Q15166 354 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 FAM27D1Q5T7N8 215 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 OR4K17Q8NGC6 315 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 THOC3Q96J01 351 aaKnown RBP13.46□□□□□ -0.25
MKS1-202ENST00000393119 ZPBPQ9BS86 351 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 ALG12Q9BV10 488 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 C6orf62Q9GZU0 229 aaPredicted RBP13.46□□□□□ -0.25
MKS1-202ENST00000393119 PPIL3Q9H2H8 161 aaKnown RBP13.46□□□□□ -0.25
MKS1-202ENST00000393119 HPF1Q9NWY4 346 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 CRNNQ9UBG3 495 aaPredicted RBP13.46□□□□□ -0.25
MKS1-202ENST00000393119 KLHL21Q9UJP4 597 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 STUB1Q9UNE7 303 aa13.46□□□□□ -0.25
MKS1-202ENST00000393119 CAB39Q9Y376 341 aaPredicted RBP13.46□□□□□ -0.25
MKS1-202ENST00000393119 TERTO14746 1132 aaKnown RBP13.45□□□□□ -0.26
MKS1-202ENST00000393119 RAD1O60671 282 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms