RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 OR4F3Q6IEY1 312 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 SCARA5Q6ZMJ2 495 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 CCDC121Q6ZUS5 278 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 TMEM179BQ7Z7N9 219 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 CDH26Q8IXH8 852 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 BBOF1Q8ND07 529 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 ZNF680Q8NEM1 530 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 BBS1Q8NFJ9 593 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 OR7G1Q8NGA0 311 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 OR6C4Q8NGE1 309 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 HTR3CQ8WXA8 447 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 SHC3Q92529 594 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 RAPGEF5Q92565 580 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 C19orf60Q96EN9 201 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 ZBED3Q96IU2 234 aaPredicted RBP2.22□□□□□ -2.05
PTPRC-205ENST00000391970 ANKRD36BP1Q96IX9 119 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 B3GALT6Q96L58 329 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 OPALINQ96PE5 141 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 SLC38A2Q96QD8 506 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 CTRCQ99895 268 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 NICN1Q9BSH3 213 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 NUP58Q9BVL2 599 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 LRRC19Q9H756 370 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 SLC38A10Q9HBR0 1119 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 SLC40A1Q9NP59 571 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 MARCH5Q9NX47 278 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 PAQR5Q9NXK6 330 aaPredicted RBP2.22□□□□□ -2.05
PTPRC-205ENST00000391970 PRPF19Q9UMS4 504 aaKnown RBP2.22□□□□□ -2.05
PTPRC-205ENST00000391970 LRRC42Q9Y546 428 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 UHRF1BP1Q6BDS2 1440 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 NSD3Q9BZ95 1437 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 ABCA8O94911 1581 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 MAST1Q9Y2H9 1570 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 TNRQ92752 1358 aa2.22□□□□□ -2.05
PTPRC-205ENST00000391970 ADGRL1O94910 1474 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 ABCA6Q8N139 1617 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 A0A0G2JRQ6 117 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 LOC100653049A0A140TA62 436 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 A0A1B0GVG6 124 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 CENPBD1B2RD01 187 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 IDSB3KWA1 339 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 SPECC1L-ADORA2AF8WAN1 911 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 AP3B1O00203 1094 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 RGS16O15492 202 aaPredicted RBP2.21□□□□□ -2.06
PTPRC-205ENST00000391970 ZNF264O43296 627 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 ADGRB2O60241 1585 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 STX10O60499 249 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 PFKFB2O60825 505 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 RAMP3O60896 148 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 KRT34O76011 436 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 SNX4O95219 450 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 PAEPP09466 180 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 PABPC4LP0CB38 370 aaKnown RBP2.21□□□□□ -2.06
PTPRC-205ENST00000391970 RBMY1CP0DJD4 496 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 NCK1P16333 377 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 HOXB8P17481 243 aaPredicted RBP2.21□□□□□ -2.06
PTPRC-205ENST00000391970 PRKACBP22694 351 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 HMGB2P26583 209 aaKnown RBP2.21□□□□□ -2.06
PTPRC-205ENST00000391970 CRABP2P29373 138 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 SLC26A3P40879 764 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 QARSP47897 775 aaKnown RBP2.21□□□□□ -2.06
PTPRC-205ENST00000391970 CEBPDP49716 269 aaPredicted RBP2.21□□□□□ -2.06
PTPRC-205ENST00000391970 HLCSP50747 726 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 DUSP3P51452 185 aaPredicted RBP2.21□□□□□ -2.06
PTPRC-205ENST00000391970 HADHBP55084 474 aaKnown RBP2.21□□□□□ -2.06
PTPRC-205ENST00000391970 ATP6V0D1P61421 351 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 PSMC5P62195 406 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 NDPQ00604 133 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 GRB7Q14451 532 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 LRRK1Q38SD2 2015 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 Q3ZCU0 254 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 KLF17Q5JT82 389 aaPredicted RBP2.21□□□□□ -2.06
PTPRC-205ENST00000391970 EOGTQ5NDL2 527 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 PDZK1Q5T2W1 519 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 AADACL4Q5VUY2 407 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 DUPD1Q68J44 220 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 ACOT7LQ6ZUV0 252 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 UTS2BQ765I0 119 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 EFL1Q7Z2Z2 1120 aaKnown RBP2.21□□□□□ -2.06
PTPRC-205ENST00000391970 ZNF100Q8IYN0 542 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 ARHGEF28Q8N1W1 1705 aaKnown RBP2.21□□□□□ -2.06
PTPRC-205ENST00000391970 ALLCQ8N6M5 410 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 BHLHE23Q8NDY6 225 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 OR52I1Q8NGK6 324 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 OR8J1Q8NGP2 316 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 ZNF461Q8TAF7 563 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 CHCHD10Q8WYQ3 142 aaPredicted RBP2.21□□□□□ -2.06
PTPRC-205ENST00000391970 OR1E3Q8WZA6 343 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 ST8SIA1Q92185 356 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 C16orf74Q96GX8 76 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 CNDP1Q96KN2 507 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 PGLYRP4Q96LB8 373 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 MAGEB18Q96M61 343 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 TECTBQ96PL2 329 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 PLEKHF1Q96S99 279 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 NPY6RQ99463 290 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 ZBTB18Q99592 522 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 RIOK1Q9BRS2 568 aaKnown RBP2.21□□□□□ -2.06
PTPRC-205ENST00000391970 C9orf16Q9BUW7 83 aa2.21□□□□□ -2.06
PTPRC-205ENST00000391970 RAB34Q9BZG1 259 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms