RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 FREM3P0C091 2139 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 DMXL2Q8TDJ6 3036 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 IRGMA1A4Y4 181 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 K7EM74 188 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 MRPL3P09001 348 aaKnown RBP23.98■■□□□ 1.43
MSX1-201ENST00000382723 JUNBP17275 347 aaPredicted RBP23.98■■□□□ 1.43
MSX1-201ENST00000382723 LHX2P50458 406 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 RAC3P60763 192 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 RAB39AQ14964 217 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 ADCK1Q86TW2 530 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 WDFY1Q8IWB7 410 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 ADGRG7Q96K78 797 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 OXGR1Q96P68 337 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 EXO5Q9H790 373 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 ACKR4Q9NPB9 350 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 CLEC2DQ9UHP7 191 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 DIMT1Q9UNQ2 313 aaKnown RBP23.98■■□□□ 1.43
MSX1-201ENST00000382723 MKRN2OSH3BPM6 223 aa23.97■■□□□ 1.43
MSX1-201ENST00000382723 TFECO14948 347 aaPredicted RBP23.97■■□□□ 1.43
MSX1-201ENST00000382723 LCKP06239 509 aa23.97■■□□□ 1.43
MSX1-201ENST00000382723 ENPP1P22413 925 aa23.97■■□□□ 1.43
MSX1-201ENST00000382723 PYCR1P32322 319 aa23.97■■□□□ 1.43
MSX1-201ENST00000382723 PLA2G5P39877 138 aa23.97■■□□□ 1.43
MSX1-201ENST00000382723 LGALS3BPQ08380 585 aa23.97■■□□□ 1.43
MSX1-201ENST00000382723 IRF3Q14653 427 aa23.97■■□□□ 1.43
MSX1-201ENST00000382723 ZNF239Q16600 458 aaKnown RBP23.97■■□□□ 1.43
MSX1-201ENST00000382723 GPR141Q7Z602 305 aa23.97■■□□□ 1.43
MSX1-201ENST00000382723 OR6K6Q8NGW6 343 aa23.97■■□□□ 1.43
MSX1-201ENST00000382723 RORBQ92753 470 aa23.97■■□□□ 1.43
MSX1-201ENST00000382723 MUL1Q969V5 352 aa23.97■■□□□ 1.43
MSX1-201ENST00000382723 ZHX1-C8orf76Q96EF9 292 aa23.97■■□□□ 1.43
MSX1-201ENST00000382723 EMC6Q9BV81 110 aa23.97■■□□□ 1.43
MSX1-201ENST00000382723 MFRPQ9BY79 579 aa23.97■■□□□ 1.43
MSX1-201ENST00000382723 FGF20Q9NP95 211 aaPredicted RBP23.97■■□□□ 1.43
MSX1-201ENST00000382723 TNFRSF10DQ9UBN6 386 aa23.97■■□□□ 1.43
MSX1-201ENST00000382723 EXOGQ9Y2C4 368 aaKnown RBP23.97■■□□□ 1.43
MSX1-201ENST00000382723 PRSS37A4D1T9 235 aa23.96■■□□□ 1.43
MSX1-201ENST00000382723 PTHP01270 115 aa23.96■■□□□ 1.43
MSX1-201ENST00000382723 ZNF24P17028 368 aa23.96■■□□□ 1.43
MSX1-201ENST00000382723 ZNF43P17038 809 aa23.96■■□□□ 1.43
MSX1-201ENST00000382723 DCKP27707 260 aa23.96■■□□□ 1.43
MSX1-201ENST00000382723 SLC25A1P53007 311 aa23.96■■□□□ 1.43
MSX1-201ENST00000382723 BIDP55957 195 aa23.96■■□□□ 1.43
MSX1-201ENST00000382723 ZNF169Q14929 603 aaPredicted RBP23.96■■□□□ 1.43
MSX1-201ENST00000382723 PON3Q15166 354 aa23.96■■□□□ 1.43
MSX1-201ENST00000382723 TBCEQ15813 527 aaPredicted RBP23.96■■□□□ 1.43
MSX1-201ENST00000382723 B3GNT6Q6ZMB0 384 aa23.96■■□□□ 1.43
MSX1-201ENST00000382723 ABTB1Q969K4 478 aaPredicted RBP23.96■■□□□ 1.43
MSX1-201ENST00000382723 TSPAN10Q9H1Z9 355 aaPredicted RBP23.96■■□□□ 1.43
MSX1-201ENST00000382723 RASD1Q9Y272 281 aa23.96■■□□□ 1.43
MSX1-201ENST00000382723 ZNF99A8MXY4 864 aaPredicted RBP23.96■■□□□ 1.43
MSX1-201ENST00000382723 DCTN6O00399 190 aa23.96■■□□□ 1.43
MSX1-201ENST00000382723 TMPRSS3P57727 454 aa23.96■■□□□ 1.43
MSX1-201ENST00000382723 TBR1Q16650 682 aa23.96■■□□□ 1.43
MSX1-201ENST00000382723 EXD3Q8N9H8 876 aa23.96■■□□□ 1.43
MSX1-201ENST00000382723 SYT14Q8NB59 555 aa23.96■■□□□ 1.43
MSX1-201ENST00000382723 PROKR2Q8NFJ6 384 aa23.96■■□□□ 1.43
MSX1-201ENST00000382723 EXTL1Q92935 676 aa23.96■■□□□ 1.43
MSX1-201ENST00000382723 ZDHHC11Q9H8X9 412 aa23.96■■□□□ 1.43
MSX1-201ENST00000382723 A6NIZ1 184 aa23.95■■□□□ 1.42
MSX1-201ENST00000382723 NPIPB13A6NJU9 1138 aa23.95■■□□□ 1.42
MSX1-201ENST00000382723 NPIPB4C9JG80 1138 aa23.95■■□□□ 1.42
MSX1-201ENST00000382723 ETV1P50549 477 aa23.95■■□□□ 1.42
MSX1-201ENST00000382723 AGFG1P52594 562 aaKnown RBP23.95■■□□□ 1.42
MSX1-201ENST00000382723 RAP1BP61224 184 aa23.95■■□□□ 1.42
MSX1-201ENST00000382723 RAP1AP62834 184 aa23.95■■□□□ 1.42
MSX1-201ENST00000382723 TMED1Q13445 227 aa23.95■■□□□ 1.42
MSX1-201ENST00000382723 NHLRC1Q6VVB1 395 aa23.95■■□□□ 1.42
MSX1-201ENST00000382723 OR6V1Q8N148 313 aa23.95■■□□□ 1.42
MSX1-201ENST00000382723 NUAK2Q9H093 628 aa23.95■■□□□ 1.42
MSX1-201ENST00000382723 ACACAQ13085 2346 aa23.95■■□□□ 1.42
MSX1-201ENST00000382723 TRGV5A0A0B4J1U4 118 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 SMAD9O15198 467 aaKnown RBP23.94■■□□□ 1.42
MSX1-201ENST00000382723 TRAF3IP2O43734 574 aaPredicted RBP23.94■■□□□ 1.42
MSX1-201ENST00000382723 MYL12AP19105 171 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 PSMB9P28065 219 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 CLDN18P56856 261 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 PDSS1Q5T2R2 415 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 LCN1P1Q5VSP4 162 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 FOXB2Q5VYV0 432 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 C9orf43Q8TAL5 461 aaPredicted RBP23.94■■□□□ 1.42
MSX1-201ENST00000382723 NEIL3Q8TAT5 605 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 SMAP2Q8WU79 429 aaPredicted RBP23.94■■□□□ 1.42
MSX1-201ENST00000382723 ZNF845Q96IR2 970 aaPredicted RBP23.94■■□□□ 1.42
MSX1-201ENST00000382723 ERGIC3Q9Y282 383 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 TNRC6AQ8NDV7 1962 aaKnown RBP23.94■■□□□ 1.42
MSX1-201ENST00000382723 SLC22A23A1A5C7 686 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 DNPH1O43598 174 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 ZNF708P17019 499 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 GP2P55259 537 aaKnown RBP23.94■■□□□ 1.42
MSX1-201ENST00000382723 SLC35D3Q5M8T2 416 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 EEF1A1P5Q5VTE0 462 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 LYPD4Q6UWN0 246 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 OR2T4Q8NH00 348 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 ROBO4Q8WZ75 1007 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 ABHD17AQ96GS6 310 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 ALG12Q9BV10 488 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 ADGRL4Q9HBW9 690 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 TIGARQ9NQ88 270 aa23.94■■□□□ 1.42
MSX1-201ENST00000382723 VSX1Q9NZR4 365 aaPredicted RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms