RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 H7C1C5 153 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 ATXN7O15265 892 aaPredicted RBP14.04□□□□□ -0.16
CCDC107-204ENST00000378409 WDR1O75083 606 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 FCGR2AP12318 317 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 ACVR2AP27037 513 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 SLC16A1P53985 500 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 RAP1BP61224 184 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 SNRPGP62308 76 aaKnown RBP14.04□□□□□ -0.16
CCDC107-204ENST00000378409 LCN6P62502 163 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 RAP1AP62834 184 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 RBPJQ06330 500 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 CRMP1Q14194 572 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 PDK3Q15120 406 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 RNPS1Q15287 305 aaKnown RBP14.04□□□□□ -0.16
CCDC107-204ENST00000378409 SF3B4Q15427 424 aaKnown RBP eCLIP14.04□□□□□ -0.16
CCDC107-204ENST00000378409 ZNF362Q5T0B9 420 aaPredicted RBP14.04□□□□□ -0.16
CCDC107-204ENST00000378409 FAM205BPQ63HN1 556 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 NHLRC1Q6VVB1 395 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 HDDC2Q7Z4H3 204 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 CYB561A3Q8NBI2 242 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 SLC37A3Q8NCC5 494 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 RHOXF1Q8NHV9 184 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 CNIH3Q8TBE1 160 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 ZNF385AQ96PM9 386 aaKnown RBP14.04□□□□□ -0.16
CCDC107-204ENST00000378409 NMNAT3Q96T66 252 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 UBAP1Q9NZ09 502 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 PCDHGB5Q9Y5G0 923 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 FLVCR1Q9Y5Y0 555 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 NBEAQ8NFP9 2946 aa14.04□□□□□ -0.16
CCDC107-204ENST00000378409 COL6A6A6NMZ7 2263 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 SPENQ96T58 3664 aaKnown RBP14.03□□□□□ -0.16
CCDC107-204ENST00000378409 IGKV3D-15A0A087WSY6 115 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 SLC35F4A4IF30 521 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 FAM183AA6NL82 134 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 ZNF726A6NNF4 738 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 PRR23D1E9PI22 279 aaPredicted RBP14.03□□□□□ -0.16
CCDC107-204ENST00000378409 PRRG2O14669 202 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 AKAP8O43823 692 aaKnown RBP14.03□□□□□ -0.16
CCDC107-204ENST00000378409 PRR23D2P0DMB1 279 aaPredicted RBP14.03□□□□□ -0.16
CCDC107-204ENST00000378409 GABRA1P14867 456 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 GABRB1P18505 474 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 PAICSP22234 425 aaKnown RBP14.03□□□□□ -0.16
CCDC107-204ENST00000378409 CDKN2AP42771 156 aaKnown RBP14.03□□□□□ -0.16
CCDC107-204ENST00000378409 EFNB1P98172 346 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 RUNX1T1Q06455 604 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 ITGADQ13349 1161 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 CAMK2DQ13557 499 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 CARD17Q5XLA6 110 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 GTF2IRD2BQ6EKJ0 949 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 PLBD1Q6P4A8 553 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 RPTNQ6XPR3 784 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 CXXC5Q7LFL8 322 aaKnown RBP14.03□□□□□ -0.16
CCDC107-204ENST00000378409 ADCK1Q86TW2 530 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 GTF2IRD2Q86UP8 949 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 CPOQ8IVL8 374 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 WDFY1Q8IWB7 410 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 ZIC4Q8N9L1 334 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 APH1BQ8WW43 257 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 HDAC2Q92769 488 aaKnown RBP14.03□□□□□ -0.16
CCDC107-204ENST00000378409 LRR1Q96L50 414 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 ADAD1Q96M93 576 aaKnown RBP14.03□□□□□ -0.16
CCDC107-204ENST00000378409 FN3KQ9H479 309 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 MED20Q9H944 212 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 HINT3Q9NQE9 182 aaKnown RBP14.03□□□□□ -0.16
CCDC107-204ENST00000378409 CLN6Q9NWW5 311 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 DNAJC27Q9NZQ0 273 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 EMC3Q9P0I2 261 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 ING1Q9UK53 422 aaPredicted RBP14.03□□□□□ -0.16
CCDC107-204ENST00000378409 CLEC4AQ9UMR7 237 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 FREM1Q5H8C1 2179 aa14.03□□□□□ -0.16
CCDC107-204ENST00000378409 OR6C68A6NDL8 312 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 GPR171O14626 319 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 SLC19A2O60779 497 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 WBP4O75554 376 aaKnown RBP14.02□□□□□ -0.17
CCDC107-204ENST00000378409 TRMUO75648 421 aaKnown RBP14.02□□□□□ -0.17
CCDC107-204ENST00000378409 RENP00797 406 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 FMO3P31513 532 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 PTGER4P35408 488 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 CDK5R2Q13319 367 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 C1orf185Q5T7R7 199 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 NSUN5P2Q63ZY6 315 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 NIPAL3Q6P499 406 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 AAED1Q7RTV5 226 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 BCDIN3DQ7Z5W3 292 aaKnown RBP14.02□□□□□ -0.17
CCDC107-204ENST00000378409 TUSC5Q8IXB3 177 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 FAM26EQ8N5C1 309 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 SYT14Q8NB59 555 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 NPEPL1Q8NDH3 523 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 OR6X1Q8NH79 312 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 FBLIM1Q8WUP2 373 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 WNT2BQ93097 391 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 ZNF566Q969W8 418 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 RNF122Q9H9V4 155 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 CALHM2Q9HA72 323 aa14.02□□□□□ -0.17
CCDC107-204ENST00000378409 FASNP49327 2511 aaKnown RBP14.02□□□□□ -0.17
CCDC107-204ENST00000378409 INTS1Q8N201 2190 aaKnown RBP14.02□□□□□ -0.17
CCDC107-204ENST00000378409 RP1L1Q8IWN7 2480 aaPredicted RBP14.01□□□□□ -0.17
CCDC107-204ENST00000378409 PRSS37A4D1T9 235 aa14.01□□□□□ -0.17
CCDC107-204ENST00000378409 CD8B2A6NJW9 211 aa14.01□□□□□ -0.17
CCDC107-204ENST00000378409 ZNF724A8MTY0 619 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms