RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 TMEM5Q9Y2B1 443 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 PCNX3Q9H6A9 2034 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 A0A0G2JMP0 313 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 A0A0X1KG70 313 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 ATP6V1G1O75348 118 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 RECKO95980 971 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 MT-ND4P03905 459 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 UCHL1P09936 223 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 SBK2P0C263 348 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 ZNF24P17028 368 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 EBPQ15125 230 aaKnown RBP7.36□□□□□ -1.23
CKAP2-203ENST00000378037 BCL2L15Q5TBC7 163 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 MEDAGQ5VYS4 303 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 ANKRD13BQ86YJ7 626 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 ALDH16A1Q8IZ83 802 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 MORN4Q8NDC4 146 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 OR4M2Q8NGB6 313 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 FNDC8Q8TC99 324 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 DNAJA4Q8WW22 397 aaPredicted RBP7.36□□□□□ -1.23
CKAP2-203ENST00000378037 PTP4A1Q93096 173 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 NT5DC2Q9H857 520 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 SRPK3Q9UPE1 567 aa7.36□□□□□ -1.23
CKAP2-203ENST00000378037 A0A1W2PR77 199 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 H3BMH7 237 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 SURF4O15260 269 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 CER1O95813 267 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 LIMS3P0CW19 117 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 LIMS4P0CW20 117 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 ABOP16442 354 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 ENPP1P22413 925 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 VAMP1P23763 118 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 FPR3P25089 353 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 HLA-DMAP28067 261 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 MRPL19P49406 292 aaKnown RBP7.35□□□□□ -1.23
CKAP2-203ENST00000378037 FXYD6P3P58550 94 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 ARG2P78540 354 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 GPLD1P80108 840 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 ZMYND11Q15326 602 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 SLC22A6Q4U2R8 563 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 C1orf140Q5VVS0 124 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 SLC25A25Q6KCM7 469 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 MZT2AQ6P582 158 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 DCXRQ7Z4W1 244 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 PRR18Q8N4B5 295 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 KIAA1958Q8N8K9 716 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 OR51D1Q8NGF3 324 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 S100ZQ8WXG8 99 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 TMEM234Q8WY98 164 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 AP3S1Q92572 193 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 SLC46A1Q96NT5 459 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 GINS4Q9BRT9 223 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 STRADBQ9C0K7 418 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 PITHD1Q9GZP4 211 aaPredicted RBP7.35□□□□□ -1.23
CKAP2-203ENST00000378037 ATG5Q9H1Y0 275 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 OR10A4Q9H209 315 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 QPCTLQ9NXS2 382 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 TESQ9UGI8 421 aaKnown RBP7.35□□□□□ -1.23
CKAP2-203ENST00000378037 SIGLEC7Q9Y286 467 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 SIRT4Q9Y6E7 314 aaPredicted RBP7.35□□□□□ -1.23
CKAP2-203ENST00000378037 TRAV18A0A075B6X5 111 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 TMEM269A0A1B0GVZ9 245 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 FITM1A5D6W6 292 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 OR6C70A6NIJ9 312 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 TP53I11O14683 189 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 CD79AP11912 226 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 RAB3BP20337 219 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 ARFRP1Q13795 201 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 CBFBQ13951 182 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 NIPAL3Q6P499 406 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 CPEB2Q7Z5Q1 589 aaKnown RBP7.35□□□□□ -1.23
CKAP2-203ENST00000378037 AKAP14Q86UN6 197 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 ZNF611Q8N823 705 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 OR51A4Q8NGJ6 313 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 OR5M9Q8NGP3 310 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 OR2T4Q8NH00 348 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 BRIX1Q8TDN6 353 aaKnown RBP7.35□□□□□ -1.23
CKAP2-203ENST00000378037 ZNRF4Q8WWF5 429 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 MAFIPQ8WZ33 124 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 GPN2Q9H9Y4 310 aaPredicted RBP7.35□□□□□ -1.23
CKAP2-203ENST00000378037 NUDT15Q9NV35 164 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 EXOSC1Q9Y3B2 195 aaKnown RBP7.35□□□□□ -1.23
CKAP2-203ENST00000378037 LRRK1Q38SD2 2015 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 LNP1A1A4G5 178 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 CENPXA8MT69 81 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 TNFSF11O14788 317 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 CD2P06729 351 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 ERGP11308 486 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 SPNP16150 400 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 SPI1P17947 270 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 IL32P24001 234 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 GPR3P46089 330 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 SLC37A1P57057 533 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 GABARAPL2P60520 117 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 TSPAN5P62079 268 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 PPP3R1P63098 170 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 TUBA3CQ13748 450 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 SYT6Q5T7P8 510 aaPredicted RBP7.35□□□□□ -1.23
CKAP2-203ENST00000378037 VHLLQ6RSH7 139 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 RAB43Q86YS6 212 aa7.35□□□□□ -1.23
CKAP2-203ENST00000378037 GID4Q8IVV7 300 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms