RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 A6NIZ1 184 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 PRR23D1E9PI22 279 aaPredicted RBP11.52□□□□□ -0.57
CBWD3-203ENST00000377344 MPZL2O60487 215 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 TXNDC12O95881 172 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 PRR23D2P0DMB1 279 aaPredicted RBP11.52□□□□□ -0.57
CBWD3-203ENST00000377344 PAICSP22234 425 aaKnown RBP11.52□□□□□ -0.57
CBWD3-203ENST00000377344 CDKN2AP42771 156 aaKnown RBP11.52□□□□□ -0.57
CBWD3-203ENST00000377344 RAP1BP61224 184 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 ISL1P61371 349 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 RAP1AP62834 184 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 CAMK2DQ13557 499 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 CRMP1Q14194 572 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 MAD2L1BPQ15013 274 aaPredicted RBP11.52□□□□□ -0.57
CBWD3-203ENST00000377344 ARMC4Q5T2S8 1044 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 HDDC2Q7Z4H3 204 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 BCDIN3DQ7Z5W3 292 aaKnown RBP11.52□□□□□ -0.57
CBWD3-203ENST00000377344 ADGRE4PQ86SQ3 457 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 CPOQ8IVL8 374 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 TUSC5Q8IXB3 177 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 SYT14Q8NB59 555 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 SLC37A3Q8NCC5 494 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 ZNF519Q8TB69 540 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 TRUB1Q8WWH5 349 aaKnown RBP11.52□□□□□ -0.57
CBWD3-203ENST00000377344 LRR1Q96L50 414 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 CALHM2Q9HA72 323 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 EMC3Q9P0I2 261 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 CLCF1Q9UBD9 225 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 HSPE1-MOB4S4R3N1 261 aa11.52□□□□□ -0.57
CBWD3-203ENST00000377344 NPIPB13A6NJU9 1138 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 NPIPB4C9JG80 1138 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 GPR171O14626 319 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 AKAP8O43823 692 aaKnown RBP11.51□□□□□ -0.57
CBWD3-203ENST00000377344 RENP00797 406 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 SLC16A1P53985 500 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 RUNX1T1Q06455 604 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 DBPQ10586 325 aaPredicted RBP11.51□□□□□ -0.57
CBWD3-203ENST00000377344 ITGADQ13349 1161 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 PDK3Q15120 406 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 ZNF362Q5T0B9 420 aaPredicted RBP11.51□□□□□ -0.57
CBWD3-203ENST00000377344 C1orf185Q5T7R7 199 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 FAM205BPQ63HN1 556 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 NIPAL3Q6P499 406 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 PLBD1Q6P4A8 553 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 NHLRC1Q6VVB1 395 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 CXXC5Q7LFL8 322 aaKnown RBP11.51□□□□□ -0.57
CBWD3-203ENST00000377344 ADCK1Q86TW2 530 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 GCNT2Q8N0V5 402 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 RHOXF1Q8NHV9 184 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 ZNF566Q969W8 418 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 ADAD1Q96M93 576 aaKnown RBP11.51□□□□□ -0.57
CBWD3-203ENST00000377344 FN3KQ9H479 309 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 RERGLQ9H628 205 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 MED20Q9H944 212 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 RPRD1BQ9NQG5 326 aaKnown RBP11.51□□□□□ -0.57
CBWD3-203ENST00000377344 UBAP1Q9NZ09 502 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 DNAJC27Q9NZQ0 273 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 ING1Q9UK53 422 aaPredicted RBP11.51□□□□□ -0.57
CBWD3-203ENST00000377344 LRCH1Q9Y2L9 728 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 NOSIPQ9Y314 301 aaKnown RBP11.51□□□□□ -0.57
CBWD3-203ENST00000377344 PCDHGB5Q9Y5G0 923 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 IGHG1P01857 330 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 YES1P07947 543 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 PTGER4P35408 488 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 PER3P56645 1201 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 CLRN1P58418 232 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 SNRPGP62308 76 aaKnown RBP11.51□□□□□ -0.57
CBWD3-203ENST00000377344 TMEM201Q5SNT2 666 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 NSUN5P2Q63ZY6 315 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 AAED1Q7RTV5 226 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 WDFY1Q8IWB7 410 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 MARVELD2Q8N4S9 558 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 ZIC4Q8N9L1 334 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 NPEPL1Q8NDH3 523 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 OR9Q1Q8NGQ5 310 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 OR6X1Q8NH79 312 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 WNT2BQ93097 391 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 SLC25A44Q96H78 314 aaPredicted RBP11.51□□□□□ -0.57
CBWD3-203ENST00000377344 SYT4Q9H2B2 425 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 TP63Q9H3D4 680 aaPredicted RBP11.51□□□□□ -0.57
CBWD3-203ENST00000377344 RNF122Q9H9V4 155 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 HINT3Q9NQE9 182 aaKnown RBP11.51□□□□□ -0.57
CBWD3-203ENST00000377344 CLN6Q9NWW5 311 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 H2AFY2Q9P0M6 372 aaPredicted RBP11.51□□□□□ -0.57
CBWD3-203ENST00000377344 TINAGQ9UJW2 476 aa11.51□□□□□ -0.57
CBWD3-203ENST00000377344 IGKV3D-15A0A087WSY6 115 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 PRSS37A4D1T9 235 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 OR6C68A6NDL8 312 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 CD8B2A6NJW9 211 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 ENTPD6O75354 484 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 MRPL33O75394 65 aaKnown RBP11.5□□□□□ -0.57
CBWD3-203ENST00000377344 TRMUO75648 421 aaKnown RBP11.5□□□□□ -0.57
CBWD3-203ENST00000377344 GYPBP06028 91 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 FMO3P31513 532 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 SELENOPP49908 381 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 RPS7P62081 194 aaKnown RBP11.5□□□□□ -0.57
CBWD3-203ENST00000377344 EFNB1P98172 346 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 CDK5R2Q13319 367 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 KLHL12Q53G59 568 aa11.5□□□□□ -0.57
CBWD3-203ENST00000377344 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.5□□□□□ -0.57
CBWD3-203ENST00000377344 DOLPP1Q86YN1 238 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms