RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 GJC3Q8NFK1 279 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 SEMA4GQ9NTN9 838 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 SSC5DA1L4H1 1573 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 A0A1W2PPH5 198 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 GSTP1P09211 210 aaKnown RBP12.54□□□□□ -0.4
GPC6-201ENST00000377047 BLVRBP30043 206 aaPredicted RBP12.54□□□□□ -0.4
GPC6-201ENST00000377047 KIR2DL3P43628 341 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 RIPPLY1Q0D2K3 151 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 NXNL2Q5VZ03 156 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 LRRC28Q86X40 367 aaPredicted RBP12.54□□□□□ -0.4
GPC6-201ENST00000377047 ZNF511Q8NB15 262 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 FGGYQ96C11 551 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 HYLS1Q96M11 299 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 NOX3Q9HBY0 568 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 GFOD1Q9NXC2 390 aa12.54□□□□□ -0.4
GPC6-201ENST00000377047 FGF17O60258 216 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 CSO75390 466 aaKnown RBP12.53□□□□□ -0.4
GPC6-201ENST00000377047 RAB40ALP0C0E4 278 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 ALDH3B2P48448 385 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 MEP1BQ16820 701 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 PRTGQ2VWP7 1150 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 RAB40AQ8WXH6 277 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 EGLN1Q9GZT9 426 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 TMEM38AQ9H6F2 299 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 SERTAD4Q9NUC0 356 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 TMEM30AQ9NV96 361 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 COA3Q9Y2R0 106 aaPredicted RBP12.53□□□□□ -0.4
GPC6-201ENST00000377047 MKRN2OSH3BPM6 223 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 UBCP0CG48 685 aaKnown RBP12.53□□□□□ -0.4
GPC6-201ENST00000377047 ZNF92Q03936 586 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 ELP2Q6IA86 826 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 SECTM1Q8WVN6 248 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 EMC6Q9BV81 110 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 A0A1W2PPV4 95 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 SELENOFO60613 162 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 ALPLP05186 524 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 SERPINA7P05543 415 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 GIFP27352 417 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 EVI2BP34910 448 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 RPS25P62851 125 aaKnown RBP12.53□□□□□ -0.4
GPC6-201ENST00000377047 SPEM2Q0P670 501 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 C9orf152Q5JTZ5 239 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 LIPHQ8WWY8 451 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 GHSRQ92847 366 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 LIN7BQ9HAP6 207 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 HIF1ANQ9NWT6 349 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 CHRNA9Q9UGM1 479 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 ARNTP27540 789 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 GRB2P62993 217 aaKnown RBP12.53□□□□□ -0.4
GPC6-201ENST00000377047 GK2Q14410 553 aaPredicted RBP12.53□□□□□ -0.4
GPC6-201ENST00000377047 CA13Q8N1Q1 262 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 UPRTQ96BW1 309 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 ELMOD3Q96FG2 381 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 HRASLS5Q96KN8 279 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 PROCRQ9UNN8 238 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 PAPPA2Q9BXP8 1791 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 NOTOA8MTQ0 251 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 H0YIG0 161 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 PRAF2O60831 178 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 APOC3P02656 99 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 SNRPBP14678 240 aaKnown RBP12.53□□□□□ -0.4
GPC6-201ENST00000377047 NFYBP25208 207 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 SPRED3Q2MJR0 410 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 KRBOX4Q5JUW0 171 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 TMEM106AQ96A25 262 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 LYSMD1Q96S90 227 aa12.53□□□□□ -0.4
GPC6-201ENST00000377047 GFYI3L273 518 aa12.52□□□□□ -0.4
GPC6-201ENST00000377047 GABRA5P31644 462 aa12.52□□□□□ -0.4
GPC6-201ENST00000377047 S100A12P80511 92 aa12.52□□□□□ -0.4
GPC6-201ENST00000377047 TBCEQ15813 527 aaPredicted RBP12.52□□□□□ -0.4
GPC6-201ENST00000377047 TIMD4Q96H15 378 aa12.52□□□□□ -0.4
GPC6-201ENST00000377047 SLC25A31Q9H0C2 315 aa12.52□□□□□ -0.4
GPC6-201ENST00000377047 NRIP3Q9NQ35 241 aa12.52□□□□□ -0.4
GPC6-201ENST00000377047 TNFRSF10AO00220 468 aa12.52□□□□□ -0.4
GPC6-201ENST00000377047 P2RX6O15547 441 aa12.52□□□□□ -0.4
GPC6-201ENST00000377047 LCMT2O60294 686 aaKnown RBP12.52□□□□□ -0.4
GPC6-201ENST00000377047 GPR137BO60478 399 aa12.52□□□□□ -0.4
GPC6-201ENST00000377047 RFPL3O75679 317 aa12.52□□□□□ -0.4
GPC6-201ENST00000377047 RFC3P40938 356 aa12.52□□□□□ -0.4
GPC6-201ENST00000377047 APOOLQ6UXV4 268 aa12.52□□□□□ -0.4
GPC6-201ENST00000377047 MORN4Q8NDC4 146 aa12.52□□□□□ -0.4
GPC6-201ENST00000377047 C11orf40Q8WZ69 217 aa12.52□□□□□ -0.4
GPC6-201ENST00000377047 EMG1Q92979 244 aaKnown RBP12.52□□□□□ -0.4
GPC6-201ENST00000377047 IL21Q9HBE4 155 aa12.52□□□□□ -0.4
GPC6-201ENST00000377047 OR52A1Q9UKL2 312 aa12.52□□□□□ -0.4
GPC6-201ENST00000377047 METTL12A8MUP2 240 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 ADAM23O75077 832 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 HLA-AP01891 365 aaKnown RBP12.52□□□□□ -0.41
GPC6-201ENST00000377047 GABRG2P18507 467 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 USF2Q15853 346 aaPredicted RBP12.52□□□□□ -0.41
GPC6-201ENST00000377047 OTUD1Q5VV17 481 aaPredicted RBP12.52□□□□□ -0.41
GPC6-201ENST00000377047 CSF3RQ99062 836 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 NIPAL2Q9H841 368 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 UNKLQ9H9P5 680 aaKnown RBP12.52□□□□□ -0.41
GPC6-201ENST00000377047 C19orf53Q9UNZ5 99 aaPredicted RBP12.52□□□□□ -0.41
GPC6-201ENST00000377047 WDR37Q9Y2I8 494 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 M0R082 166 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 KCNK2O95069 426 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 CD22P20273 847 aa12.52□□□□□ -0.41
GPC6-201ENST00000377047 FPR3P25089 353 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms